RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 ATP8B2P98198 1209 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 CREMQ03060 361 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 MALLQ13021 153 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 DACT2Q5SW24 774 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 DCBLD1Q8N8Z6 715 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 OR2I1PQ8NGU4 316 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.62□□□□□ -1.67
PROM1-203ENST00000502943 PBKQ96KB5 322 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 CCDC9Q9Y3X0 531 aaKnown RBP4.62□□□□□ -1.67
PROM1-203ENST00000502943 NR2E3Q9Y5X4 410 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 UHRF1BP1Q6BDS2 1440 aa4.62□□□□□ -1.67
PROM1-203ENST00000502943 ZCCHC11Q5TAX3 1644 aaKnown RBP4.61□□□□□ -1.67
PROM1-203ENST00000502943 CFAP43Q8NDM7 1665 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 CYSRT1A8MQ03 144 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 TISP43B9A030 160 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 ID4P47928 161 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 NXPH1P58417 271 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 ITIH3Q06033 890 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 ZNF844Q08AG5 666 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 MGAT2Q10469 447 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 TOR2AQ5JU69 321 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 RFKQ969G6 155 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 CYFIP2Q96F07 1278 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 LRIG1Q96JA1 1093 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 C11orf54Q9H0W9 315 aaPredicted RBP4.61□□□□□ -1.67
PROM1-203ENST00000502943 SH3BP4Q9P0V3 963 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 ZBTB21Q9ULJ3 1066 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 NEU2Q9Y3R4 380 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 CARMIL1Q5VZK9 1371 aa4.61□□□□□ -1.67
PROM1-203ENST00000502943 E9PSI1 815 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 NEMP1O14524 444 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 BPIP17213 487 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 MMP13P45452 471 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 SESN3P58005 492 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 RABEP1Q15276 862 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 UTP14CQ5TAP6 766 aaKnown RBP4.6□□□□□ -1.67
PROM1-203ENST00000502943 C16orf86Q6ZW13 317 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 HOMER1Q86YM7 354 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 ZDHHC17Q8IUH5 632 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 NLGN4YQ8NFZ3 816 aaPredicted RBP4.6□□□□□ -1.67
PROM1-203ENST00000502943 HMCESQ96FZ2 354 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 KLHL32Q96NJ5 620 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 CAMKK2Q96RR4 588 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 VPS16Q9H269 839 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 ZSWIM4Q9H7M6 989 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 MYBBP1AQ9BQG0 1328 aaKnown RBP4.6□□□□□ -1.67
PROM1-203ENST00000502943 ZNF335Q9H4Z2 1342 aaPredicted RBP4.6□□□□□ -1.67
PROM1-203ENST00000502943 AKNAQ7Z591 1439 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 FANCAO15360 1455 aa4.6□□□□□ -1.67
PROM1-203ENST00000502943 MED1Q15648 1581 aaPredicted RBP4.6□□□□□ -1.67
PROM1-203ENST00000502943 CCDC195A0A1B0GUA6 201 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 KCNU1A8MYU2 1149 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 PRR23D1E9PI22 279 aaPredicted RBP4.59□□□□□ -1.67
PROM1-203ENST00000502943 SMIM22K7EJ46 135 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 SBK3P0C264 359 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 PRR23D2P0DMB1 279 aaPredicted RBP4.59□□□□□ -1.67
PROM1-203ENST00000502943 MTHFD2P13995 350 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 SRSF2Q01130 221 aaKnown RBP4.59□□□□□ -1.67
PROM1-203ENST00000502943 ANO4Q32M45 955 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 PRAMEF17Q5VTA0 474 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 TMPRSS9Q7Z410 1059 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 REPS1Q96D71 796 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 RNPC3Q96LT9 517 aaKnown RBP4.59□□□□□ -1.67
PROM1-203ENST00000502943 EBF3Q9H4W6 596 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 DKK3Q9UBP4 350 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 PCDHB1Q9Y5F3 818 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 PCDHGA2Q9Y5H1 932 aa4.59□□□□□ -1.67
PROM1-203ENST00000502943 STRCQ7RTU9 1775 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 LTBP4Q8N2S1 1624 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 GOLGA8AA7E2F4 631 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 TUBB4AP04350 444 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 PCSK6P29122 969 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 ARHGAP25P42331 645 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 ZNF134P52741 427 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 LINC00205P59089 165 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 LAMB3Q13751 1172 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 HLXQ14774 488 aaPredicted RBP4.58□□□□□ -1.68
PROM1-203ENST00000502943 CFAP52Q8N1V2 620 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 LMBR1Q8WVP7 490 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 USP7Q93009 1102 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 MFSD3Q96ES6 412 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 MANSC1Q9H8J5 431 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 FANCLQ9NW38 375 aa4.58□□□□□ -1.68
PROM1-203ENST00000502943 TUBA8Q9NY65 449 aaPredicted RBP4.58□□□□□ -1.68
PROM1-203ENST00000502943 DENND4BO75064 1496 aaPredicted RBP4.57□□□□□ -1.68
PROM1-203ENST00000502943 NEO1Q92859 1461 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 KIF27Q86VH2 1401 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 SMIM35A0A1B0GVV1 85 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 FAM171A2A8MVW0 826 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 GRM6O15303 877 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 ULK1O75385 1050 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 ZFXP17010 805 aaPredicted RBP4.57□□□□□ -1.68
PROM1-203ENST00000502943 CCKARP32238 428 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 NPTX2P47972 431 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 CTXN1P60606 82 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 CEP85Q6P2H3 762 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 RAB24Q969Q5 203 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 ORAI2Q96SN7 254 aa4.57□□□□□ -1.68
PROM1-203ENST00000502943 PRSS22Q9GZN4 317 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms