RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 LPIN3Q9BQK8 851 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 LLPHQ9BRT6 129 aaKnown RBP15.97■□□□□ 0.15
TRAF4-212ENST00000498540 SMG9Q9H0W8 520 aaKnown RBP15.97■□□□□ 0.15
TRAF4-212ENST00000498540 ARRDC1-AS1Q9H2J1 176 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 OBP2AQ9NY56 170 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 ASB3Q9Y575 518 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 CHD6Q8TD26 2715 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 DENND4CQ5VZ89 1909 aa15.97■□□□□ 0.15
TRAF4-212ENST00000498540 ATG2BQ96BY7 2078 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 NPHP3-ACAD11A0A0J9YXS1 232 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 FAM189A1O60320 539 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 FOXD2O60548 495 aaPredicted RBP15.96■□□□□ 0.15
TRAF4-212ENST00000498540 U2AF2P26368 475 aaKnown RBP eCLIP15.96■□□□□ 0.151e-6■□□□□ 8.6
TRAF4-212ENST00000498540 SMTNP53814 917 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 ENOX2Q16206 610 aaKnown RBP15.96■□□□□ 0.15
TRAF4-212ENST00000498540 ARHGAP15Q53QZ3 475 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 IL31Q6EBC2 164 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 SYNPOQ8N3V7 929 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 DDX1Q92499 740 aaKnown RBP15.96■□□□□ 0.15
TRAF4-212ENST00000498540 BICD1Q96G01 975 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 PNMA5Q96PV4 448 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 PLIN2Q99541 437 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 IL21Q9HBE4 155 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 OBSL1O75147 1896 aa15.96■□□□□ 0.15
TRAF4-212ENST00000498540 SCN1AP35498 2009 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 FGF19O95750 216 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 ODC1P11926 461 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 ATF6P18850 670 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 PRPHP41219 470 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 LIMK1P53667 647 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 LILRA4P59901 499 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
TRAF4-212ENST00000498540 PLCB2Q00722 1185 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 ITPRIPL2Q3MIP1 535 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 N4BP2L1Q5TBK1 243 aaPredicted RBP15.95■□□□□ 0.14
TRAF4-212ENST00000498540 ARMCX5Q6P1M9 558 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 DTHD1Q6ZMT9 781 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 ITIH5Q86UX2 942 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 KBTBD6Q86V97 674 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 GAB3Q8WWW8 586 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 CHFRQ96EP1 664 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 SENP8Q96LD8 212 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 SEPT5Q99719 369 aaPredicted RBP15.95■□□□□ 0.14
TRAF4-212ENST00000498540 TASP1Q9H6P5 420 aa15.95■□□□□ 0.14
TRAF4-212ENST00000498540 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.95■□□□□ 0.14
TRAF4-212ENST00000498540 TCHHQ07283 1943 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 LAD1O00515 517 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 TM4SF5O14894 197 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 XPOTO43592 962 aaKnown RBP15.94■□□□□ 0.14
TRAF4-212ENST00000498540 RPP40O75818 363 aaKnown RBP15.94■□□□□ 0.14
TRAF4-212ENST00000498540 EPN2O95208 641 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 ZNF806P0C7X5 589 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 PMLP29590 882 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 WEE1P30291 646 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 RAP1GAPP47736 663 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 MCM2P49736 904 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 SLC12A3P55017 1021 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 NCKAP1LP55160 1127 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 SLC39A12Q504Y0 691 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 HYIQ5T013 277 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 SPATA1Q5VX52 437 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 JADE1Q6IE81 842 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 FSTL4Q6MZW2 842 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 SYT2Q8N9I0 419 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-212ENST00000498540 C12orf50Q8NA57 414 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-212ENST00000498540 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 SLC46A2Q9BY10 475 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 SMOC1Q9H4F8 434 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.94■□□□□ 0.14
TRAF4-212ENST00000498540 HSFX1Q9UBD0 423 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 KCNG1Q9UIX4 513 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 ANGPTL2Q9UKU9 493 aa15.94■□□□□ 0.14
TRAF4-212ENST00000498540 ZNF638Q14966 1978 aaKnown RBP15.94■□□□□ 0.14
TRAF4-212ENST00000498540 OTOL1A6NHN0 477 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-212ENST00000498540 HNRNPDLO14979 420 aaKnown RBP15.93■□□□□ 0.14
TRAF4-212ENST00000498540 OGTO15294 1046 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 ADRB2P07550 413 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 NFICP08651 508 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 CDC25CP30307 473 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 LIG4P49917 911 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 MGAT5BQ3V5L5 792 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 ARSHQ5FYA8 562 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 TMEM196Q5HYL7 178 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 C9orf57Q5W0N0 161 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 TRIM68Q6AZZ1 485 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 CACNA2D4Q7Z3S7 1137 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 FAM212AQ96EL1 285 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 LOXL4Q96JB6 756 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 ZCWPW1Q9H0M4 648 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 RPF1Q9H9Y2 349 aaKnown RBP15.93■□□□□ 0.14
TRAF4-212ENST00000498540 HPS4Q9NQG7 708 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 GKN1Q9NS71 199 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 POLR3BQ9NW08 1133 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-212ENST00000498540 CCL26Q9Y258 94 aa15.93■□□□□ 0.14
TRAF4-212ENST00000498540 FRYQ5TBA9 3013 aa15.92■□□□□ 0.14
TRAF4-212ENST00000498540 KIAA1549LQ6ZVL6 1849 aa15.92■□□□□ 0.14
TRAF4-212ENST00000498540 CYP11A1P05108 521 aa15.92■□□□□ 0.14
TRAF4-212ENST00000498540 PLA2G4BP0C869 781 aa15.92■□□□□ 0.14
TRAF4-212ENST00000498540 CCDC192P0DO97 292 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms