RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ARHGAP44Q17R89 818 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 CTXN3Q4LDR2 81 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 PDXDC1Q6P996 788 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 TRIM65Q6PJ69 517 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 PRSS55Q6UWB4 352 aaPredicted RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 ANKS3Q6ZW76 656 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 RRAGAQ7L523 313 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 DPH6Q7L8W6 267 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 APTXQ7Z2E3 356 aaKnown RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 TMEM86AQ8N2M4 240 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 PDCL2Q8N4E4 241 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 OR6B3Q8NGW1 331 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 VN1R3Q9BXE9 311 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 XPO4Q9C0E2 1151 aaKnown RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 DNAI2Q9GZS0 605 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 LMAN2LQ9H0V9 348 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 SMYD3Q9H7B4 428 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 VRTNQ9H8Y1 702 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 APOBEC3GQ9HC16 384 aaKnown RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 FAM207AQ9NSI2 230 aaPredicted RBP12.25□□□□□ -0.45
CTTN-208ENST00000498223 L1RE1Q9UN81 338 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 CHD7Q9P2D1 2997 aa12.25□□□□□ -0.45
CTTN-208ENST00000498223 A8MXQ7 604 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 CTSAP10619 480 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 TRIM21P19474 475 aaKnown RBP12.24□□□□□ -0.45
CTTN-208ENST00000498223 GNL1P36915 607 aaPredicted RBP12.24□□□□□ -0.45
CTTN-208ENST00000498223 LHX1P48742 406 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 KLK7P49862 253 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 MFAP3P55082 362 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 ERVFC1P60507 584 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 APBA1Q02410 837 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 DSG1Q02413 1049 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 KCNMA1Q12791 1236 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 CUL2Q13617 745 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 RAPGEF1Q13905 1077 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 NR1I3Q14994 352 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 PTPN21Q16825 1174 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 SOWAHAQ2M3V2 549 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 RTP2Q5QGT7 225 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 GJB7Q6PEY0 223 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 ARHGEF19Q8IW93 802 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 LMO3Q8TAP4 145 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 FAM81BQ96LP2 452 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 ASB2Q96Q27 587 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 ERGIC2Q96RQ1 377 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 MRPL45Q9BRJ2 306 aaKnown RBP12.24□□□□□ -0.45
CTTN-208ENST00000498223 ZBP1Q9H171 429 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 CYP3A43Q9HB55 503 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 NGRNQ9NPE2 291 aaKnown RBP12.24□□□□□ -0.45
CTTN-208ENST00000498223 DDX43Q9NXZ2 648 aaKnown RBP12.24□□□□□ -0.45
CTTN-208ENST00000498223 APEX2Q9UBZ4 518 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 DNAJC12Q9UKB3 198 aa12.24□□□□□ -0.45
CTTN-208ENST00000498223 CYP11A1P05108 521 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 KRT5P13647 590 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 CPB1P15086 417 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 RPL17P18621 184 aaKnown RBP12.23□□□□□ -0.45
CTTN-208ENST00000498223 WARSP23381 471 aaKnown RBP12.23□□□□□ -0.45
CTTN-208ENST00000498223 DNAJB1P25685 340 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 PCSK1P29120 753 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 USP8P40818 1118 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 ASPAP45381 313 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 MRPS5P82675 430 aaKnown RBP12.23□□□□□ -0.45
CTTN-208ENST00000498223 TSPY1Q01534 308 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 CREMQ03060 361 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 KLHDC7AQ5VTJ3 777 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 PDE12Q6L8Q7 609 aaKnown RBP12.23□□□□□ -0.45
CTTN-208ENST00000498223 PHLDB3Q6NSJ2 640 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 CACNA2D4Q7Z3S7 1137 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 PIK3R5Q8WYR1 880 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 ARID3AQ99856 593 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 EMILIN2Q9BXX0 1053 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 SDCBP2Q9H190 292 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTTN-208ENST00000498223 CHST7Q9NS84 486 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 PCDHB4Q9Y5E5 795 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 MTCH2Q9Y6C9 303 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 PTPRDP23468 1912 aa12.23□□□□□ -0.45
CTTN-208ENST00000498223 TACC1O75410 805 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 FAM163BP0C2L3 166 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 ACAT1P24752 427 aaKnown RBP12.22□□□□□ -0.45
CTTN-208ENST00000498223 KLRC2P26717 231 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 IRS1P35568 1242 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 POLR2FP61218 127 aaKnown RBP12.22□□□□□ -0.45
CTTN-208ENST00000498223 GCNT1Q02742 428 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 PTPN14Q15678 1187 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 ZNF394Q53GI3 561 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 KIAA0319Q5VV43 1072 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 IQCEQ6IPM2 695 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 SARM1Q6SZW1 724 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 ENOSF1Q7L5Y1 443 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 OSTM1Q86WC4 334 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 DRC7Q8IY82 874 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 RNF168Q8IYW5 571 aaPredicted RBP12.22□□□□□ -0.45
CTTN-208ENST00000498223 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 TTC39CQ8N584 583 aa12.22□□□□□ -0.45
CTTN-208ENST00000498223 LNX1Q8TBB1 728 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms