RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PPP1R35Q8TAP8 253 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 COQ10AQ96MF6 247 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 TRIB1Q96RU8 372 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 VKORC1Q9BQB6 163 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 LRFN3Q9BTN0 628 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 TTPALQ9BTX7 342 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 CNPPD1Q9BV87 410 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 ARMT1Q9H993 441 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 UNKLQ9H9P5 680 aaKnown RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 RSAD1Q9HA92 442 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 CNNM1Q9NRU3 951 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 C1orf112Q9NSG2 853 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 GOLGA6AQ9NYA3 693 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 VSX1Q9NZR4 365 aaPredicted RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 TOR1BO14657 336 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 PPFIA2O75334 1257 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 TUSC2O75896 110 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 SUN1O94901 812 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 RHOBTB3O94955 611 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 GCP02774 474 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 HDCP19113 662 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 FDXRP22570 491 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 AGFG1P52594 562 aaKnown RBP3.63□□□□□ -1.83
RIF1-212ENST00000498041 SOX8P57073 446 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 GPSM2P81274 684 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 EXOSC9Q06265 439 aaKnown RBP3.63□□□□□ -1.83
RIF1-212ENST00000498041 TCF15Q12870 199 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 DYRK1AQ13627 763 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 PREPLQ4J6C6 727 aaPredicted RBP3.63□□□□□ -1.83
RIF1-212ENST00000498041 ANO6Q4KMQ2 910 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 ARHGAP29Q52LW3 1261 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 HECTD2Q5U5R9 776 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 Q6YL49 198 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 OVCH2Q7RTZ1 564 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 POC1BQ8TC44 478 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 LINC00476Q8WZB0 136 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 TSR2Q969E8 191 aaKnown RBP3.63□□□□□ -1.83
RIF1-212ENST00000498041 CAVIN3Q969G5 261 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 TMEM125Q96AQ2 219 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 PTCD3Q96EY7 689 aaKnown RBP3.63□□□□□ -1.83
RIF1-212ENST00000498041 LRIG1Q96JA1 1093 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 TINAGL1Q9GZM7 467 aaPredicted RBP3.63□□□□□ -1.83
RIF1-212ENST00000498041 CASS4Q9NQ75 786 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 SYBUQ9NX95 663 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 ETAA1Q9NY74 926 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 CPA4Q9UI42 421 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 PCDHA6Q9UN73 950 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 AGAP1Q9UPQ3 857 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 DMTF1Q9Y222 760 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 SMARCA2P51531 1590 aa3.63□□□□□ -1.83
RIF1-212ENST00000498041 POLR2AP24928 1970 aaKnown RBP3.62□□□□□ -1.83
RIF1-212ENST00000498041 A0A087X1B8 175 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 M0QYG6 137 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 SOAT2O75908 522 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 KIF20AO95235 890 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 MYBP10242 640 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 KCNJ5P48544 419 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 PURAQ00577 322 aaKnown RBP3.62□□□□□ -1.83
RIF1-212ENST00000498041 FSTL1Q12841 308 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 HLXQ14774 488 aaPredicted RBP3.62□□□□□ -1.83
RIF1-212ENST00000498041 GFOD2Q3B7J2 385 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 CD300EQ496F6 205 aaPredicted RBP3.62□□□□□ -1.83
RIF1-212ENST00000498041 FAM160B1Q5W0V3 765 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 NPNTQ6UXI9 565 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 SLC30A10Q6XR72 485 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 MICALCLQ6ZW33 695 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 TMPRSS9Q7Z410 1059 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 ZNF575Q86XF7 245 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 FMNL3Q8IVF7 1028 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 ADGRG5Q8IZF4 528 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 LNX2Q8N448 690 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 BEND2Q8NDZ0 799 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 SNX19Q92543 992 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 ZG16BQ96DA0 208 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 Q96MF0 132 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 B3GNT5Q9BYG0 378 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 TMEM60Q9H2L4 133 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 TOR3AQ9H497 397 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 FAM204AQ9H8W3 233 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 INTS13Q9NVM9 706 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 PIH1D1Q9NWS0 290 aaKnown RBP3.62□□□□□ -1.83
RIF1-212ENST00000498041 STAP2Q9UGK3 403 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 PACSIN3Q9UKS6 424 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.62□□□□□ -1.83
RIF1-212ENST00000498041 EPN1Q9Y6I3 576 aaPredicted RBP3.62□□□□□ -1.83
RIF1-212ENST00000498041 MAST3O60307 1309 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 SPATA31A3Q5VYP0 1347 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 NESP48681 1621 aa3.62□□□□□ -1.83
RIF1-212ENST00000498041 EIF4G1Q04637 1599 aaKnown RBP3.61□□□□□ -1.83
RIF1-212ENST00000498041 A0A1W2PPL8 197 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 CAPN8A6NHC0 703 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 FAM227AF5H4B4 570 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 MARCH6O60337 910 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 VPS4BO75351 444 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 ESRRBO95718 433 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 THP07101 528 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 SRGNP10124 158 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 GATA3P23771 443 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 SEC24CP53992 1094 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 MC2RQ01718 297 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms