RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 FEZF2Q8TBJ5 459 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 SEMA4DQ92854 862 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 OXCT2Q9BYC2 517 aaPredicted RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 NOC2LQ9Y3T9 749 aaKnown RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 TRPM7Q96QT4 1865 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 VGLL3A8MV65 326 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 PSTPIP1O43586 416 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 GPR32O75388 356 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 TADA2AO75478 443 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 KCNE1P15382 129 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 EFHC1Q5JVL4 640 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 SPOPLQ6IQ16 392 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 GDF6Q6KF10 455 aaPredicted RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 KIAA1841Q6NSI8 718 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 NOP9Q86U38 636 aaKnown RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 C1orf131Q8NDD1 294 aaKnown RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 ZNF606Q8WXB4 792 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 ISCUQ9H1K1 167 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 LHX5Q9H2C1 402 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 IKZF4Q9H2S9 585 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 VRTNQ9H8Y1 702 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 AAASQ9NRG9 546 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 KLK14Q9P0G3 267 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 PCDHGC5Q9Y5F6 944 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 PODXLO00592 558 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 ADCY6O43306 1168 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 RHOXF2BP0C7M4 288 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 KRT3P12035 628 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 RFC2P35250 354 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 ZNF268Q14587 947 aaPredicted RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 CNGA2Q16280 664 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 ARL13BQ3SXY8 428 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 MMS22LQ6ZRQ5 1243 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 LRRC8DQ7L1W4 858 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 PHF13Q86YI8 300 aaPredicted RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 MCOLN2Q8IZK6 566 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 RNF34Q969K3 372 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 KREMEN1Q96MU8 473 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 RHOXF2Q9BQY4 288 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 CARD9Q9H257 536 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 SLITRK6Q9H5Y7 841 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 FAM114A2Q9NRY5 505 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 DONSONQ9NYP3 566 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 TELO2Q9Y4R8 837 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 COL11A1P12107 1806 aaPredicted RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 ATP8B1O43520 1251 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 ITIH3Q06033 890 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 BST2Q10589 180 aaKnown RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 MTMR3Q13615 1198 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 ACAP1Q15027 740 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 GLRA4Q5JXX5 417 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 C9orf57Q5W0N0 161 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 C15orf39Q6ZRI6 1047 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 BZW1Q7L1Q6 419 aaKnown RBP8.86□□□□□ -0.99
USP54-215ENST00000497106 SLC20A1Q8WUM9 679 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 R3HDMLQ9H3Y0 253 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 STK39Q9UEW8 545 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 PTCH2Q9Y6C5 1203 aa8.86□□□□□ -0.99
USP54-215ENST00000497106 HSF2BPO75031 334 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 TJP3O95049 919 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 ATP1A1P05023 1023 aaKnown RBP8.85□□□□□ -0.99
USP54-215ENST00000497106 CYP1A2P05177 515 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 FAM200BP0CF97 657 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 CD52P31358 61 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 GTF2F1P35269 517 aaKnown RBP eCLIP8.85□□□□□ -0.99
USP54-215ENST00000497106 TFDP2Q14188 446 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 SLC24A5Q71RS6 500 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 HDXQ7Z353 690 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 FAM228AQ86W67 206 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 SPATA2LQ8IUW3 424 aaPredicted RBP8.85□□□□□ -0.99
USP54-215ENST00000497106 ARHGAP18Q8N392 663 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 KLHDC9Q8NEP7 349 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 CCDC114Q96M63 670 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 DEFB118Q96PH6 123 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 THAP2Q9H0W7 228 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 PADI3Q9ULW8 664 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 ZNF236Q9UL36 1845 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 TARSL2A2RTX5 802 aaKnown RBP8.85□□□□□ -0.99
USP54-215ENST00000497106 ERBB2P04626 1255 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 AKAP5P24588 427 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 NKX3-2P78367 333 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 PLCB3Q01970 1234 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 SLC10A6Q3KNW5 377 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 FAM102AQ5T9C2 384 aaPredicted RBP8.85□□□□□ -0.99
USP54-215ENST00000497106 CRELD2Q6UXH1 353 aaPredicted RBP8.85□□□□□ -0.99
USP54-215ENST00000497106 CCDC105Q8IYK2 499 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 RCOR2Q8IZ40 523 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 CPA5Q8WXQ8 436 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 MINDY3Q9H8M7 445 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 CYLDQ9NQC7 956 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 A0A1W2PQ45 241 aaPredicted RBP8.85□□□□□ -0.99
USP54-215ENST00000497106 A0A1W2PQY0 241 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 ADAMTS4O75173 837 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 ZRANB2O95218 330 aaKnown RBP eCLIP8.85□□□□□ -0.99
USP54-215ENST00000497106 AMHP03971 560 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 PNMA6AP0CW24 399 aaPredicted RBP8.85□□□□□ -0.99
USP54-215ENST00000497106 ADORA2BP29275 332 aa8.85□□□□□ -0.99
USP54-215ENST00000497106 NDST1P52848 882 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms