RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ZNF252P-AS1Q0IIN9 211 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 AMHR2Q16671 573 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 MAMDC4Q6UXC1 1216 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 CROCCP2Q86T23 111 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 SRLQ86TD4 932 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 RNF25Q96BH1 459 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 TLCD1Q96CP7 247 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 FAXDC2Q96IV6 333 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 RBM41Q96IZ5 413 aaKnown RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 FDXACB1Q9BRP7 624 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 HEMGNQ9BXL5 484 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 PDZD7Q9H5P4 517 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 NXF1Q9UBU9 619 aaKnown RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 SLC12A6Q9UHW9 1150 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 SIX4Q9UIU6 781 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 STRIP2Q9ULQ0 834 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 AKT3Q9Y243 479 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 R3HDM2Q9Y2K5 976 aaKnown RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 SRRM3A6NNA2 597 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 MED7O43513 233 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 ZNF286BP0CG31 522 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 STAG3L1P0CL83 205 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 CETPP11597 493 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 ITIH2P19823 946 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 RAP1GAPP47736 663 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 CCT5P48643 541 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 CCNG2Q16589 344 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 PTGISQ16647 500 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 ODF2Q5BJF6 829 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 PPP1R15BQ5SWA1 713 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 DCUN1D2Q6PH85 259 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 ZNF467Q7Z7K2 595 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 ERICH1Q86X53 443 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 C1orf127Q8N9H9 656 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 C3orf20Q8ND61 904 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 ATL2Q8NHH9 583 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 AFG1LQ8WV93 481 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 EPN3Q9H201 632 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 SEMA4AQ9H3S1 761 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 LRRC4CQ9HCJ2 640 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 RRP15Q9Y3B9 282 aaKnown RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 IVNS1ABPQ9Y6Y0 642 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 TRIP11Q15643 1979 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 UNCXA6NJT0 531 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 LACTBL1A8MY62 500 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 RIPK2O43353 540 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 KRT1P04264 644 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 PAEPP09466 180 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 ATF2P15336 505 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 CD19P15391 556 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 TMOD1P28289 359 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 ADCYAP1R1P41586 468 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 MAGOHP61326 146 aaKnown RBP13.81□□□□□ -0.2
GARNL3-220ENST00000496711 ADCY2Q08462 1091 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 SLC29A2Q14542 456 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 LRRC38Q5VT99 294 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 JADE1Q6IE81 842 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 RCOR2Q8IZ40 523 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 WDTC1Q8N5D0 677 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 KATNBL1Q9H079 304 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 RABEP2Q9H5N1 569 aa13.81□□□□□ -0.2
GARNL3-220ENST00000496711 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 GLTPD2A6NH11 291 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 NDUFAB1O14561 156 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 TP73O15350 636 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 STRNO43815 780 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CAND2O75155 1236 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 VTNP04004 478 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ITGB3P05106 788 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 POLR2BP30876 1174 aaKnown RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 OGDHQ02218 1023 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CAV1Q03135 178 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 NFX1Q12986 1120 aaKnown RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 PIGHQ14442 188 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 KYAT1Q16773 422 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 SKIDA1Q1XH10 827 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 WDR72Q3MJ13 1102 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CYP4A22Q5TCH4 519 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 DENND1BQ6P3S1 775 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 RHBDF2Q6PJF5 856 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 MTHFD1LQ6UB35 978 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 TRMT10CQ7L0Y3 403 aaKnown RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CCDC25Q86WR0 208 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 NIPA2Q8N8Q9 360 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 PGM2Q96G03 612 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CPB2Q96IY4 423 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 SLITRK1Q96PX8 696 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 C16orf70Q9BSU1 422 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 TMEM109Q9BVC6 243 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 LHX5Q9H2C1 402 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ASB7Q9H672 318 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 KLHL11Q9NVR0 708 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 MORF4L1Q9UBU8 362 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 PDCD11Q14690 1871 aaKnown RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CCL15-CCL14A0A0B4J2E2 113 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 DCDC2CA8MYV0 355 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms