RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 B3GALT6Q96L58 329 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 OXCT2Q9BYC2 517 aaPredicted RBP23.27■■□□□ 1.32
C9orf3-222ENST00000496567 GANQ9H2C0 597 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 NGRNQ9NPE2 291 aaKnown RBP23.27■■□□□ 1.32
C9orf3-222ENST00000496567 MRPL17Q9NRX2 175 aaKnown RBP23.27■■□□□ 1.32
C9orf3-222ENST00000496567 DNAJC12Q9UKB3 198 aa23.27■■□□□ 1.32
C9orf3-222ENST00000496567 CHD9Q3L8U1 2897 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 GABRDO14764 452 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 GNL1P36915 607 aaPredicted RBP23.26■■□□□ 1.31
C9orf3-222ENST00000496567 RAP1GAPP47736 663 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 ZNF75DP51815 510 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 MRPL58Q14197 206 aaKnown RBP23.26■■□□□ 1.31
C9orf3-222ENST00000496567 KIAA0319Q5VV43 1072 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 ZNF280DQ6N043 979 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 GJB7Q6PEY0 223 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 OR6B3Q8NGW1 331 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 IQCDQ96DY2 449 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 MRFAP1L1Q96HT8 127 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 ARID3AQ99856 593 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 TCF25Q9BQ70 676 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 MRPL45Q9BRJ2 306 aaKnown RBP23.26■■□□□ 1.31
C9orf3-222ENST00000496567 NUP58Q9BVL2 599 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 SDCBP2Q9H190 292 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 ENTPD7Q9NQZ7 604 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 CISHQ9NSE2 258 aa23.26■■□□□ 1.31
C9orf3-222ENST00000496567 VWA8A3KMH1 1905 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 ITIH6Q6UXX5 1313 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 SOX1O00570 391 aaPredicted RBP23.25■■□□□ 1.31
C9orf3-222ENST00000496567 NOL4O94818 638 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 CREMQ03060 361 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 INCA1Q0VD86 236 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 PTPN21Q16825 1174 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 IQCEQ6IPM2 695 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 LNX1Q8TBB1 728 aaPredicted RBP23.25■■□□□ 1.31
C9orf3-222ENST00000496567 GDPD5Q8WTR4 605 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 KREMEN1Q96MU8 473 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 DNAI2Q9GZS0 605 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.25■■□□□ 1.31
C9orf3-222ENST00000496567 DDX43Q9NXZ2 648 aaKnown RBP23.25■■□□□ 1.31
C9orf3-222ENST00000496567 BARX2Q9UMQ3 279 aaPredicted RBP23.25■■□□□ 1.31
C9orf3-222ENST00000496567 FHOD1Q9Y613 1164 aa23.25■■□□□ 1.31
C9orf3-222ENST00000496567 C2CD2LO14523 706 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 LPXNO60711 386 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 CD58P19256 250 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 DNAJB1P25685 340 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 PCSK1P29120 753 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 POLR2FP61218 127 aaKnown RBP23.24■■□□□ 1.31
C9orf3-222ENST00000496567 SMC1AQ14683 1233 aaKnown RBP23.24■■□□□ 1.31
C9orf3-222ENST00000496567 PSMD5Q16401 504 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 CTXN3Q4LDR2 81 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 ZNF697Q5TEC3 545 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 SPECC1LQ69YQ0 1117 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 UNC93AQ86WB7 457 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 MICAL1Q8TDZ2 1067 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 KAT5Q92993 513 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 NAA15Q9BXJ9 866 aaKnown RBP23.24■■□□□ 1.31
C9orf3-222ENST00000496567 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.24■■□□□ 1.31
C9orf3-222ENST00000496567 BACE2Q9Y5Z0 518 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 IRAK3Q9Y616 596 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 TSC2P49815 1807 aa23.24■■□□□ 1.31
C9orf3-222ENST00000496567 EPOPA6NHQ4 379 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 A8MXQ7 604 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 CXCL14O95715 111 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 MRE11P49959 708 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 ERVFC1P60507 584 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 RAPGEF1Q13905 1077 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 PTPN14Q15678 1187 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 PTPROQ16827 1216 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 ARHGAP44Q17R89 818 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 FIGNQ5HY92 759 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 CACNA2D4Q7Z3S7 1137 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 VSTM4Q8IW00 320 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 ACBD6Q9BR61 282 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 STK33Q9BYT3 514 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 CEP72Q9P209 647 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 MTRRQ9UBK8 725 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 STXBP5LQ9Y2K9 1186 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 OR6C75A6NL08 312 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 FSCN2O14926 492 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 EPHB6O15197 1021 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 CILPO75339 1184 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 CA8P35219 290 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 NDST1P52848 882 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 CAMK1Q14012 370 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 HABP4Q5JVS0 413 aaKnown RBP23.23■■□□□ 1.31
C9orf3-222ENST00000496567 PRSS55Q6UWB4 352 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-222ENST00000496567 OSTM1Q86WC4 334 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 UBR7Q8N806 425 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 LRCH3Q96II8 777 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 EDEM3Q9BZQ6 932 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 TTYH1Q9H313 450 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-222ENST00000496567 FNIP2Q9P278 1114 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 PCDHB4Q9Y5E5 795 aa23.23■■□□□ 1.31
C9orf3-222ENST00000496567 LILRB3O75022 631 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 ACO1P21399 889 aaKnown RBP23.22■■□□□ 1.31
C9orf3-222ENST00000496567 PLPP4Q5VZY2 271 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 GPR153Q6NV75 609 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 MRPL43Q8N983 215 aaKnown RBP23.22■■□□□ 1.31
C9orf3-222ENST00000496567 AUTS2Q8WXX7 1259 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 SHC3Q92529 594 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms