RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 SP100P23497 879 aaPredicted RBP24.41■■□□□ 1.5
CHRD-217ENST00000496527 CCNE1P24864 410 aa24.41■■□□□ 1.5
CHRD-217ENST00000496527 FKBP3Q00688 224 aaKnown RBP24.41■■□□□ 1.5
CHRD-217ENST00000496527 OR10T2Q8NGX3 314 aa24.41■■□□□ 1.5
CHRD-217ENST00000496527 EEF2KMTQ96G04 330 aa24.41■■□□□ 1.5
CHRD-217ENST00000496527 TMEM209Q96SK2 561 aa24.41■■□□□ 1.5
CHRD-217ENST00000496527 MKNK1Q9BUB5 465 aa24.41■■□□□ 1.5
CHRD-217ENST00000496527 WDR6Q9NNW5 1121 aaKnown RBP24.41■■□□□ 1.5
CHRD-217ENST00000496527 NCOR1O75376 2440 aa24.41■■□□□ 1.5
CHRD-217ENST00000496527 SEC24AO95486 1093 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 LRG1P02750 347 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 C4BPAP04003 597 aaKnown RBP24.4■■□□□ 1.5
CHRD-217ENST00000496527 EPB41P11171 864 aaKnown RBP24.4■■□□□ 1.5
CHRD-217ENST00000496527 CD44P16070 742 aaKnown RBP24.4■■□□□ 1.5
CHRD-217ENST00000496527 BMP6P22004 513 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 ATICP31939 592 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 PMS1P54277 932 aaKnown RBP24.4■■□□□ 1.5
CHRD-217ENST00000496527 TDRD10Q5VZ19 366 aaKnown RBP24.4■■□□□ 1.5
CHRD-217ENST00000496527 KLHL10Q6JEL2 608 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 DPH6Q7L8W6 267 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 TRIML1Q8N9V2 468 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 SPATA18Q8TC71 538 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 SYAP1Q96A49 352 aaPredicted RBP24.4■■□□□ 1.5
CHRD-217ENST00000496527 PGLYRP2Q96PD5 576 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 RTP3Q9BQQ7 232 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 ZCWPW1Q9H0M4 648 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 CLSTN2Q9H4D0 955 aa24.4■■□□□ 1.5
CHRD-217ENST00000496527 CLUHO75153 1309 aa24.39■■□□□ 1.5
CHRD-217ENST00000496527 TRIM49BA6NDI0 452 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 CLSTN1O94985 981 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 POU2F2P09086 479 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 LHX1P48742 406 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 MYL6P60660 151 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 MYL7Q01449 175 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 ENPEPQ07075 957 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 SOWAHAQ2M3V2 549 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 ADGRF2Q8IZF7 708 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 MMS19Q96T76 1030 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 DDX43Q9NXZ2 648 aaKnown RBP24.39■■□□□ 1.49
CHRD-217ENST00000496527 USTQ9Y2C2 406 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 INSL5Q9Y5Q6 135 aa24.39■■□□□ 1.49
CHRD-217ENST00000496527 TSC2P49815 1807 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 PPP1R3GB7ZBB8 358 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 STAU1O95793 577 aaKnown RBP24.38■■□□□ 1.49
CHRD-217ENST00000496527 TNNC1P63316 161 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 TSPY1Q01534 308 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 NCOA4Q13772 614 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 WDR72Q3MJ13 1102 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 SLC39A12Q504Y0 691 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 C1orf220Q5T0J3 134 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 SV2AQ7L0J3 742 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 OTOP3Q7RTS5 596 aa24.38■■□□□ 1.49
CHRD-217ENST00000496527 GRASPQ7Z6J2 395 aaPredicted RBP24.38■■□□□ 1.49
CHRD-217ENST00000496527 DCP1BQ8IZD4 617 aaKnown RBP24.38■■□□□ 1.49
CHRD-217ENST00000496527 TDRD5Q8NAT2 981 aaKnown RBP24.38■■□□□ 1.49
CHRD-217ENST00000496527 C2orf16Q68DN1 1984 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 BICDL2A1A5D9 508 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 MTMR11A4FU01 709 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 C2CD4DB7Z1M9 353 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 SLC16A3O15427 465 aaKnown RBP24.37■■□□□ 1.49
CHRD-217ENST00000496527 TRIM49P0CI25 452 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 TRIM49CP0CI26 452 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 SMARCB1Q12824 385 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 ZACNQ401N2 412 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 ZC3H3Q8IXZ2 948 aaKnown RBP24.37■■□□□ 1.49
CHRD-217ENST00000496527 ATAD1Q8NBU5 361 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 NELFBQ8WX92 580 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 ACSF2Q96CM8 615 aaPredicted RBP24.37■■□□□ 1.49
CHRD-217ENST00000496527 ACBD6Q9BR61 282 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 CTNND2Q9UQB3 1225 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 CUL9Q8IWT3 2517 aa24.37■■□□□ 1.49
CHRD-217ENST00000496527 GABRDO14764 452 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 VNN2O95498 520 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 PCSK1P29120 753 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 DUSP4Q13115 394 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 ZNF699Q32M78 642 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 LIMS2Q7Z4I7 341 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 OSTM1Q86WC4 334 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 RNF135Q8IUD6 432 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 ELMOD1Q8N336 334 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 PLCD3Q8N3E9 789 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 XYLT2Q9H1B5 865 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 NUP62CLQ9H1M0 184 aa24.36■■□□□ 1.49
CHRD-217ENST00000496527 NXF1Q9UBU9 619 aaKnown RBP24.36■■□□□ 1.49
CHRD-217ENST00000496527 VNN1O95497 513 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 GCLMP48507 274 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 TWF1Q12792 350 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 PAK1Q13153 545 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 PLD1Q13393 1074 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 SGSM1Q2NKQ1 1148 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 ZNF667Q5HYK9 610 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 LRRTM3Q86VH5 581 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 C2orf15Q8WU43 125 aaKnown RBP24.35■■□□□ 1.49
CHRD-217ENST00000496527 MMRN2Q9H8L6 949 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 VRTNQ9H8Y1 702 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 DNMT3BQ9UBC3 853 aaKnown RBP24.35■■□□□ 1.49
CHRD-217ENST00000496527 HSFX1Q9UBD0 423 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 SLC27A5Q9Y2P5 690 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 YIPF1Q9Y548 306 aa24.35■■□□□ 1.49
CHRD-217ENST00000496527 STX10O60499 249 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms