RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 SPRED3Q2MJR0 410 aa13.05□□□□□ -0.32
PDE6B-212ENST00000496514 DNAJC24Q6P3W2 148 aa13.05□□□□□ -0.32
PDE6B-212ENST00000496514 PRRT2Q7Z6L0 340 aaPredicted RBP13.05□□□□□ -0.32
PDE6B-212ENST00000496514 CCDC33Q8N5R6 958 aa13.05□□□□□ -0.32
PDE6B-212ENST00000496514 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
PDE6B-212ENST00000496514 OGTO15294 1046 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 GAD2Q05329 585 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 PTP4A2Q12974 167 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 ENOSF1Q7L5Y1 443 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 ERO1BQ86YB8 467 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 FEZF2Q8TBJ5 459 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 AFG1LQ8WV93 481 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 FAM49AQ9H0Q0 323 aaPredicted RBP13.04□□□□□ -0.32
PDE6B-212ENST00000496514 CDT1Q9H211 546 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 HES2Q9Y543 173 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 CD48P09326 243 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 ATF2P15336 505 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 RFC5P40937 340 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 CLDN10P78369 228 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 AMHR2Q16671 573 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 GLRA4Q5JXX5 417 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 GDAP1Q8TB36 358 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 SYNCQ9H7C4 482 aa13.04□□□□□ -0.32
PDE6B-212ENST00000496514 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
PDE6B-212ENST00000496514 LACTBL1A8MY62 500 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 PODXLO00592 558 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 MEFVO15553 781 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 HCRTO43612 131 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 BPIFB4P59827 614 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 CDO1Q16878 200 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 SH3PXD2AQ5TCZ1 1133 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 FBXW10Q5XX13 1052 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 RHOT1Q8IXI2 618 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ANKRD13AQ8IZ07 590 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 THOC1Q96FV9 657 aaKnown RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 PRMT1Q99873 361 aaKnown RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 TMEM121Q9BTD3 319 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 APOL6Q9BWW8 343 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 KCNK9Q9NPC2 374 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ANAPC5Q9UJX4 755 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 CPSF3Q9UKF6 684 aaKnown RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 RASGRF2O14827 1237 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 CETPP11597 493 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 P3H1Q32P28 736 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 PTPN20Q4JDL3 420 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 IER5Q5VY09 327 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 JADE1Q6IE81 842 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ERICH1Q86X53 443 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ART4Q93070 314 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 DONSONQ9NYP3 566 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 AGTPBP1Q9UPW5 1226 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ABLIM1O14639 778 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 ASPAP45381 313 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 RGS7P49802 495 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 NBPF20Q3BBV1 942 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 PRAMEF19Q5SWL8 479 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 IZUMO3Q5VZ72 239 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 CYP4X1Q8N118 509 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 PIWIL1Q96J94 861 aaKnown RBP13.03□□□□□ -0.32
PDE6B-212ENST00000496514 LRRC19Q9H756 370 aa13.03□□□□□ -0.32
PDE6B-212ENST00000496514 NFX1Q12986 1120 aaKnown RBP13.02□□□□□ -0.32
PDE6B-212ENST00000496514 CPLX4Q7Z7G2 160 aa13.02□□□□□ -0.32
PDE6B-212ENST00000496514 KIAA0319LQ8IZA0 1049 aa13.02□□□□□ -0.32
PDE6B-212ENST00000496514 C12orf29Q8N999 325 aa13.02□□□□□ -0.32
PDE6B-212ENST00000496514 C1orf127Q8N9H9 656 aa13.02□□□□□ -0.32
PDE6B-212ENST00000496514 NLRP7Q8WX94 980 aa13.02□□□□□ -0.32
PDE6B-212ENST00000496514 SIX4Q9UIU6 781 aa13.02□□□□□ -0.32
PDE6B-212ENST00000496514 PIGRP01833 764 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 STAG3L1P0CL83 205 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 MMP8P22894 467 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 IVDP26440 423 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 CORO7P57737 925 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 ZKSCAN8Q15776 578 aaPredicted RBP13.02□□□□□ -0.33
PDE6B-212ENST00000496514 KIZQ2M2Z5 673 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 WDR49Q8IV35 697 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 HSPH1Q92598 858 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 CPXM1Q96SM3 734 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 TMEM134Q9H6X4 195 aa13.02□□□□□ -0.33
PDE6B-212ENST00000496514 RPF1Q9H9Y2 349 aaKnown RBP13.02□□□□□ -0.33
PDE6B-212ENST00000496514 METTL5Q9NRN9 209 aaKnown RBP13.02□□□□□ -0.33
PDE6B-212ENST00000496514 GMNCA6NCL1 334 aa13.01□□□□□ -0.33
PDE6B-212ENST00000496514 GH1P01241 217 aa13.01□□□□□ -0.33
PDE6B-212ENST00000496514 TNNC2P02585 160 aa13.01□□□□□ -0.33
PDE6B-212ENST00000496514 HSPA6P17066 643 aa13.01□□□□□ -0.33
PDE6B-212ENST00000496514 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
PDE6B-212ENST00000496514 PSMA2P25787 234 aa13.01□□□□□ -0.33
PDE6B-212ENST00000496514 IL1R2P27930 398 aa13.01□□□□□ -0.33
PDE6B-212ENST00000496514 POLR2BP30876 1174 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms