RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 WSCD1Q658N2 575 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 CBWD2Q8IUF1 395 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 CXorf38Q8TB03 319 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 NOC3LQ8WTT2 800 aaKnown RBP16.94■□□□□ 0.3
HDAC4-213ENST00000496347 BORCS6Q96GS4 357 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 ANKRD36BP1Q96IX9 119 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 KXD1Q9BQD3 176 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 BLZF1Q9H2G9 400 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 CRISPLD1Q9H336 500 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 PCIF1Q9H4Z3 704 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 TBC1D17Q9HA65 648 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 PDE11AQ9HCR9 933 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 F5P12259 2224 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 COL4A2P08572 1712 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 KRBA1A5PL33 1030 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 FGF19O95750 216 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 CCR2P41597 374 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 AFMP43652 599 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 RBP5P82980 135 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 CUL4BQ13620 913 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 SNRNP35Q16560 246 aaKnown RBP16.93■□□□□ 0.3
HDAC4-213ENST00000496347 SLC39A12Q504Y0 691 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 PHLDB3Q6NSJ2 640 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 ITIH5Q86UX2 942 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 WDR49Q8IV35 697 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 TMEM86AQ8N2M4 240 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 ATAD1Q8NBU5 361 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 GOLGA5Q8TBA6 731 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 ELSPBP1Q96BH3 223 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 TCEAL4Q96EI5 215 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 TMEM209Q96SK2 561 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 RPP25Q9BUL9 199 aaKnown RBP16.93■□□□□ 0.3
HDAC4-213ENST00000496347 SCAND2PQ9GZW5 306 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-213ENST00000496347 DNAJC25Q9H1X3 360 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 INTS13Q9NVM9 706 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 GDAP2Q9NXN4 497 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 SIX4Q9UIU6 781 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 CA14Q9ULX7 337 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 AGAP1Q9UPQ3 857 aa16.93■□□□□ 0.3
HDAC4-213ENST00000496347 TGFB1I1O43294 461 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 PRPF40AO75400 957 aaKnown RBP16.92■□□□□ 0.3
HDAC4-213ENST00000496347 TNNC2P02585 160 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 FCARP24071 287 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 TUFMP49411 452 aaKnown RBP16.92■□□□□ 0.3
HDAC4-213ENST00000496347 TSPY1Q01534 308 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 MYO1EQ12965 1108 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 VEPH1Q14D04 833 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 TMC8Q8IU68 726 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 CCDC105Q8IYK2 499 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 DCP1BQ8IZD4 617 aaKnown RBP16.92■□□□□ 0.3
HDAC4-213ENST00000496347 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 CSGALNACT2Q8N6G5 542 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 TTC9BQ8N6N2 239 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 TOP6BLQ8N6T0 577 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 SPPL2BQ8TCT7 592 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 SMARCD2Q92925 531 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 PSMG2Q969U7 264 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 MCRS1Q96EZ8 462 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 SHDQ96IW2 340 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 ASB16Q96NS5 453 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 GPR88Q9GZN0 384 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 EXOC1Q9NV70 894 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 HPSEQ9Y251 543 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 R3HCC1Q9Y3T6 440 aaKnown RBP16.92■□□□□ 0.3
HDAC4-213ENST00000496347 OBSL1O75147 1896 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 PTPRJQ12913 1337 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 DENND4CQ5VZ89 1909 aa16.92■□□□□ 0.3
HDAC4-213ENST00000496347 FAM237AA0A1B0GTK4 181 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 HUS1O60921 280 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 KRT19P08727 400 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 MYL4P12829 197 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 CASP1P29466 404 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 GPC5P78333 572 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 BFSP1Q12934 665 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 BECN1Q14457 450 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 NFE2Q16621 373 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-213ENST00000496347 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
HDAC4-213ENST00000496347 DUOXA2Q1HG44 320 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 FAM78AQ5JUQ0 283 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 NELFCDQ8IXH7 590 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 GRAMD1CQ8IYS0 662 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 HS6ST3Q8IZP7 471 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 XXYLT1Q8NBI6 393 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 ST13P5Q8NFI4 369 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-213ENST00000496347 SHKBP1Q8TBC3 707 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 DNASE1L2Q92874 299 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 PAGE5Q96GU1 130 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 SEPT5Q99719 369 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-213ENST00000496347 LRRC3Q9BY71 257 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 TRPV4Q9HBA0 871 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 ZFP14Q9HCL3 533 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 SERTAD1Q9UHV2 236 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 L1RE1Q9UN81 338 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 PTPRDP23468 1912 aa16.91■□□□□ 0.3
HDAC4-213ENST00000496347 ZFHX2Q9C0A1 2572 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-213ENST00000496347 TICRRQ7Z2Z1 1910 aa16.9■□□□□ 0.3
HDAC4-213ENST00000496347 RIF1Q5UIP0 2472 aaKnown RBP16.9■□□□□ 0.3
HDAC4-213ENST00000496347 A0A1B0GVL5 298 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms