RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 UBE2Q2Q8WVN8 375 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 SPATA6Q9NWH7 488 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 CTAGE15A4D2H0 777 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 CETN3O15182 167 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 AFPP02771 609 aaKnown RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 CTAGE8P0CG41 777 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 RPL13P26373 211 aaKnown RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 IFNAR2P48551 515 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 TUFMP49411 452 aaKnown RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 ZNF131P52739 623 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 ADAM15Q13444 863 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 BRD3Q15059 726 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 CACNA2D4Q7Z3S7 1137 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 TADA2BQ86TJ2 420 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 CTAGE6Q86UF2 777 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 RNF135Q8IUD6 432 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 CTAGE4Q8IX94 777 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 TXLNBQ8N3L3 684 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 PAF1Q8N7H5 531 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 RAB21Q9UL25 225 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 CCDC195A0A1B0GUA6 201 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 ACKR2O00590 384 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 IPO7O95373 1038 aaKnown RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 FBXL6Q8N531 539 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 VN1R2Q8NFZ6 395 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 SEPT5Q99719 369 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 SMCHD1A6NHR9 2005 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 FAM86C2PA6NEL3 165 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 C5orf67F2Z3F1 127 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 HIP1RO75146 1068 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 RGS20O76081 388 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 NR3C1P04150 777 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 GFPT1Q06210 699 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 BYSLQ13895 437 aaKnown RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 ZNF572Q7Z3I7 529 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 BORCS6Q96GS4 357 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 ADAM7Q9H2U9 754 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 MAFFQ9ULX9 164 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 USP18Q9UMW8 372 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 PLXNA1Q9UIW2 1896 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 C9IYK1 514 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 PNMA6AP0CW24 399 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 PLS3P13797 630 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 IL9P15248 144 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 GATMP50440 423 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 TMEM132DQ14C87 1099 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 MAPRE1Q15691 268 aaKnown RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 WDR44Q5JSH3 913 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 FIZ1Q96SL8 496 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 LACRTQ9GZZ8 138 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 DEF6Q9H4E7 631 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 SNTG2Q9NY99 539 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 SLC16A4O15374 487 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 CLASP2O75122 1294 aaKnown RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 EPB41P11171 864 aaKnown RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 POLR2FP61218 127 aaKnown RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SIGLEC14Q08ET2 396 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SMARCB1Q12824 385 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 KIF5AQ12840 1032 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 STKLD1Q8NE28 680 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 HNRNPLLQ8WVV9 542 aaKnown RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 HVCN1Q96D96 273 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 ZDHHC7Q9NXF8 308 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SEL1LQ9UBV2 794 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SAR1BQ9Y6B6 198 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 MACROD2A1Z1Q3 448 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 PODXLO00592 558 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 ENC1O14682 589 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 MAP3K13O43283 966 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 TNNI1P19237 187 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 JAM2P57087 298 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 CKAP4Q07065 602 aaKnown RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SFSWAPQ12872 951 aaKnown RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 MGAT5BQ3V5L5 792 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 PABPC1LQ4VXU2 614 aaKnown RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 TRIM67Q6ZTA4 783 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SLC39A11Q8N1S5 342 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 TRIM58Q8NG06 486 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 PNKPQ96T60 521 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 AIPL1Q9NZN9 384 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 TYW5A2RUC4 315 aaKnown RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SYN3O14994 580 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 ATG13O75143 517 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 ALDH1A2O94788 518 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 MOCS3O95396 460 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 GUCY2CP25092 1073 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 HYAL1Q12794 435 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 ASIC2Q16515 512 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 STRA6Q9BX79 667 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 BCAS3Q9H6U6 928 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 LIMD1Q9UGP4 676 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 DUSP10Q9Y6W6 482 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 MYH11P35749 1972 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 PCSK1P29120 753 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 AVPR1AP37288 418 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SNX16P57768 344 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 CYP27A1Q02318 531 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 YWHAHQ04917 246 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-206ENST00000496144 TDGQ13569 410 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms