RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ZSCAN31Q96LW9 406 aaPredicted RBP19.06■□□□□ 0.64
TMEM53-209ENST00000495630 C2orf42Q9NWW7 574 aa19.06■□□□□ 0.64
TMEM53-209ENST00000495630 LARSQ9P2J5 1176 aaKnown RBP19.06■□□□□ 0.64
TMEM53-209ENST00000495630 CITO14578 2027 aa19.06■□□□□ 0.64
TMEM53-209ENST00000495630 CCDC163A0A0D9SF12 145 aa19.05■□□□□ 0.64
TMEM53-209ENST00000495630 SCP2P22307 547 aa19.05■□□□□ 0.64
TMEM53-209ENST00000495630 ITPRIPL2Q3MIP1 535 aa19.05■□□□□ 0.64
TMEM53-209ENST00000495630 SPATA1Q5VX52 437 aa19.05■□□□□ 0.64
TMEM53-209ENST00000495630 CD302Q8IX05 232 aa19.05■□□□□ 0.64
TMEM53-209ENST00000495630 BICD1Q96G01 975 aa19.05■□□□□ 0.64
TMEM53-209ENST00000495630 SENP8Q96LD8 212 aa19.05■□□□□ 0.64
TMEM53-209ENST00000495630 RPF1Q9H9Y2 349 aaKnown RBP19.05■□□□□ 0.64
TMEM53-209ENST00000495630 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.05■□□□□ 0.64
TMEM53-209ENST00000495630 ODC1P11926 461 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 TNFSF9P41273 254 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 SLC12A3P55017 1021 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 NCKAP1LP55160 1127 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
TMEM53-209ENST00000495630 ZRSR1Q15695 479 aaKnown RBP19.04■□□□□ 0.64
TMEM53-209ENST00000495630 ENOX2Q16206 610 aaKnown RBP19.04■□□□□ 0.64
TMEM53-209ENST00000495630 IL31Q6EBC2 164 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 CACNA2D4Q7Z3S7 1137 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 PNMA5Q96PV4 448 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 TMEM209Q96SK2 561 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 ZMYM5Q9UJ78 669 aa19.04■□□□□ 0.64
TMEM53-209ENST00000495630 TM4SF5O14894 197 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 AXIN1O15169 862 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 OGTO15294 1046 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 FAM189A1O60320 539 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 ATG13O75143 517 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 SOAT2O75908 522 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 CYP11A1P05108 521 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 ZNF806P0C7X5 589 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 PLA2G4BP0C869 781 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 CDC25CP30307 473 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 LIG4P49917 911 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 GUCY2FP51841 1108 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 TNK2Q07912 1038 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 VEPH1Q14D04 833 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 TTC9BQ8N6N2 239 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 GAB3Q8WWW8 586 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 SLC46A2Q9BY10 475 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 SH2B1Q9NRF2 756 aaPredicted RBP19.03■□□□□ 0.64
TMEM53-209ENST00000495630 GKN1Q9NS71 199 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 DSEQ9UL01 958 aa19.03■□□□□ 0.64
TMEM53-209ENST00000495630 PIRO00625 290 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 EXTL3O43909 919 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 PIGRP01833 764 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 RAP1GAPP47736 663 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 MCM2P49736 904 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 SMARCB1Q12824 385 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 AASDHQ4L235 1098 aaPredicted RBP19.02■□□□□ 0.64
TMEM53-209ENST00000495630 ARSHQ5FYA8 562 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 C12orf50Q8NA57 414 aaPredicted RBP19.02■□□□□ 0.64
TMEM53-209ENST00000495630 GCNAQ96QF7 691 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 FAM83CQ9BQN1 747 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 ZCWPW1Q9H0M4 648 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 ARRDC1-AS1Q9H2J1 176 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 IL21Q9HBE4 155 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 TBX20Q9UMR3 447 aa19.02■□□□□ 0.64
TMEM53-209ENST00000495630 A0A0B4J269 797 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 PPEF2O14830 753 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 RPP40O75818 363 aaKnown RBP19.01■□□□□ 0.63
TMEM53-209ENST00000495630 PRAMEF12O95522 483 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 GRSF1Q12849 480 aaKnown RBP eCLIP19.01■□□□□ 0.63
TMEM53-209ENST00000495630 TAF12Q16514 161 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 MGAT5BQ3V5L5 792 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 TMEM196Q5HYL7 178 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 C9orf57Q5W0N0 161 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 JADE1Q6IE81 842 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 OR10T2Q8NGX3 314 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 C2orf15Q8WU43 125 aaKnown RBP19.01■□□□□ 0.63
TMEM53-209ENST00000495630 FAM212AQ96EL1 285 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 CDK5RAP3Q96JB5 506 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 PLIN2Q99541 437 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 SEPT5Q99719 369 aaPredicted RBP19.01■□□□□ 0.63
TMEM53-209ENST00000495630 ANGPTL2Q9UKU9 493 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 ODF2LQ9ULJ1 636 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 DERAQ9Y315 318 aa19.01■□□□□ 0.63
TMEM53-209ENST00000495630 NPHP3-ACAD11A0A0J9YXS1 232 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 ANO9A1A5B4 782 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 TRDMT1O14717 391 aaKnown RBP19■□□□□ 0.63
TMEM53-209ENST00000495630 HNRNPDLO14979 420 aaKnown RBP19■□□□□ 0.63
TMEM53-209ENST00000495630 AKAP3O75969 853 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 HOXC13P31276 330 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 CYP4F8P98187 520 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 ATP2C1P98194 919 aaPredicted RBP19■□□□□ 0.63
TMEM53-209ENST00000495630 AMPD2Q01433 879 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 RUNX3Q13761 415 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 SF3A2Q15428 464 aaKnown RBP19■□□□□ 0.63
TMEM53-209ENST00000495630 SLC39A12Q504Y0 691 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 RILPL1Q5EBL4 403 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 N4BP2L1Q5TBK1 243 aaPredicted RBP19■□□□□ 0.63
TMEM53-209ENST00000495630 METTL23Q86XA0 190 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 CMTM8Q8IZV2 173 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 THEM5Q8N1Q8 247 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 LPIN3Q9BQK8 851 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 CPSF3Q9UKF6 684 aaKnown RBP19■□□□□ 0.63
TMEM53-209ENST00000495630 SLC8A2Q9UPR5 921 aa19■□□□□ 0.63
TMEM53-209ENST00000495630 PCDHGA5Q9Y5G8 931 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms