RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SCYL1Q96KG9 808 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 C12orf42Q96LP6 360 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 FOXB1Q99853 325 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 SENP6Q9GZR1 1112 aaPredicted RBP7.67□□□□□ -1.18
VIM-207ENST00000495528 SEMA4AQ9H3S1 761 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 GPR108Q9NPR9 543 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 PIH1D3Q9NQM4 214 aaKnown RBP7.67□□□□□ -1.18
VIM-207ENST00000495528 CDC42EP3Q9UKI2 254 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 APOBEC2Q9Y235 224 aaKnown RBP7.67□□□□□ -1.18
VIM-207ENST00000495528 ZDHHC9Q9Y397 364 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 RABGAP1Q9Y3P9 1069 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 COL4A3BPQ9Y5P4 624 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 FPGT-TNNI3KV9GXZ4 949 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 LOC285556D6RIA3 1793 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 PLXNB2O15031 1838 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 NOLC1Q14978 699 aaKnown RBP eCLIP7.66□□□□□ -1.18
VIM-207ENST00000495528 WDR78Q5VTH9 848 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 IQSEC1Q6DN90 963 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 TATDN1Q6P1N9 297 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 CATSPERGQ6ZRH7 1159 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 PHYKPLQ8IUZ5 450 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 ITPRIPQ8IWB1 547 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 MIGA1Q8NAN2 632 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 FEZF2Q8TBJ5 459 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 ACER1Q8TDN7 264 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 GUCD1Q96NT3 240 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 MYL10Q9BUA6 226 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 DDX20Q9UHI6 824 aaKnown RBP7.66□□□□□ -1.18
VIM-207ENST00000495528 MAGEL2Q9UJ55 1249 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 MCM8Q9UJA3 840 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 ATP8A1Q9Y2Q0 1164 aa7.66□□□□□ -1.18
VIM-207ENST00000495528 NOC2LQ9Y3T9 749 aaKnown RBP7.66□□□□□ -1.18
VIM-207ENST00000495528 A0A0C4DFX4 3053 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 SLC15A5A6NIM6 579 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 SURF6O75683 361 aaKnown RBP7.65□□□□□ -1.18
VIM-207ENST00000495528 KLHL18O94889 574 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 CHGBP05060 677 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 VCAM1P19320 739 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 APEX1P27695 318 aaKnown RBP7.65□□□□□ -1.18
VIM-207ENST00000495528 CYP2C19P33261 490 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 KCNQ1P51787 676 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 CCNA1P78396 465 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 ATP8B2P98198 1209 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 LRRC32Q14392 662 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 MYBPC3Q14896 1274 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 CERKLQ49MI3 558 aaPredicted RBP7.65□□□□□ -1.18
VIM-207ENST00000495528 DDX60LQ5H9U9 1706 aaKnown RBP7.65□□□□□ -1.18
VIM-207ENST00000495528 MFSD14CQ5VZR4 134 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 TIGD7Q6NT04 549 aaPredicted RBP7.65□□□□□ -1.18
VIM-207ENST00000495528 ZDHHC14Q8IZN3 488 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 ZNF610Q8N9Z0 462 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 CLRN3Q8NCR9 226 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 TRPV1Q8NER1 839 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 SSH3Q8TE77 659 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 COG1Q8WTW3 980 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 LPAR1Q92633 364 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 CCDC8Q9H0W5 538 aaPredicted RBP7.65□□□□□ -1.18
VIM-207ENST00000495528 ZCCHC4Q9H5U6 513 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 PCDH12Q9NPG4 1184 aa7.65□□□□□ -1.18
VIM-207ENST00000495528 DBNLQ9UJU6 430 aaKnown RBP7.65□□□□□ -1.18
VIM-207ENST00000495528 SIPA1L1O43166 1804 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 KDM1AO60341 852 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 ULK1O75385 1050 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 IDH1O75874 414 aaKnown RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 PRPF6O94906 941 aaKnown RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 HOXC6P09630 235 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 GUCY1A2P33402 732 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 PLCD1P51178 756 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 USP14P54578 494 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 GJA9P57773 515 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 PHC1P78364 1004 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 OS9Q13438 667 aaPredicted RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 GRB14Q14449 540 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 STILQ15468 1287 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 PTPROQ16827 1216 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 ABCB5Q2M3G0 1257 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 FAM26FQ5R3K3 315 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 GJC2Q5T442 439 aaPredicted RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 KANK2Q63ZY3 851 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 FAM109BQ6ICB4 259 aaPredicted RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 GPR155Q7Z3F1 870 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 MAGEB6Q8N7X4 407 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 EAF2Q96CJ1 260 aaPredicted RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 GPATCH3Q96I76 525 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 LCORQ96JN0 433 aaPredicted RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 LBHD1Q9BQE6 289 aaPredicted RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 KIAA1683Q9H0B3 1180 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 RPAP3Q9H6T3 665 aaPredicted RBP7.64□□□□□ -1.19
VIM-207ENST00000495528 VTA1Q9NP79 307 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 SERPINB13Q9UIV8 391 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 DDX19BQ9UMR2 479 aa7.64□□□□□ -1.19
VIM-207ENST00000495528 A0A1W2PRG0 241 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 DNM1LO00429 736 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 GPR39O43194 453 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 CYBAP13498 195 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 SHMT1P34896 483 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 CDKN1CP49918 316 aaPredicted RBP7.63□□□□□ -1.19
VIM-207ENST00000495528 ADCY2Q08462 1091 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms