RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CHADO15335 359 aa23.9■■□□□ 1.42
HDDC3-203ENST00000494993 SOAT2O75908 522 aa23.9■■□□□ 1.42
HDDC3-203ENST00000494993 DDIT3P35638 169 aa23.9■■□□□ 1.42
HDDC3-203ENST00000494993 MLLT6P55198 1093 aaPredicted RBP23.9■■□□□ 1.42
HDDC3-203ENST00000494993 FCHO2Q0JRZ9 810 aa23.9■■□□□ 1.42
HDDC3-203ENST00000494993 MAMSTRQ6ZN01 415 aa23.9■■□□□ 1.42
HDDC3-203ENST00000494993 KRI1Q8N9T8 703 aaKnown RBP23.9■■□□□ 1.42
HDDC3-203ENST00000494993 CSGALNACT1Q8TDX6 532 aa23.9■■□□□ 1.42
HDDC3-203ENST00000494993 MKNK1Q9BUB5 465 aa23.9■■□□□ 1.42
HDDC3-203ENST00000494993 AGO2Q9UKV8 859 aaKnown RBP23.9■■□□□ 1.42
HDDC3-203ENST00000494993 FGF19O95750 216 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 TDGF1P13385 188 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 CCNE1P24864 410 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 PUM1Q14671 1186 aaKnown RBP eCLIP23.89■■□□□ 1.41
HDDC3-203ENST00000494993 SLC39A12Q504Y0 691 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 ITIH5Q86UX2 942 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 ARID3BQ8IVW6 561 aaPredicted RBP23.89■■□□□ 1.41
HDDC3-203ENST00000494993 MSANTD3Q96H12 275 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 EPSTI1Q96J88 318 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 ZCWPW1Q9H0M4 648 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 ATXN3LQ9H3M9 355 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 DSEQ9UL01 958 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 RALGAPA1Q6GYQ0 2036 aa23.89■■□□□ 1.41
HDDC3-203ENST00000494993 CENPBP07199 599 aaPredicted RBP23.88■■□□□ 1.41
HDDC3-203ENST00000494993 CHRNB1P11230 501 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 GABRR2P28476 465 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 TAF6P49848 677 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 CCR3P51677 355 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 POU5F1Q01860 360 aaKnown RBP23.88■■□□□ 1.41
HDDC3-203ENST00000494993 USP49Q70CQ1 688 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 ZNF720Q7Z2F6 126 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 DGLUCYQ7Z3D6 616 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 SFR1Q86XK3 245 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 GPIHBP1Q8IV16 184 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 HVCN1Q96D96 273 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 DPP3Q9NY33 737 aa23.88■■□□□ 1.41
HDDC3-203ENST00000494993 VPS37CA5D8V6 355 aaPredicted RBP23.87■■□□□ 1.41
HDDC3-203ENST00000494993 CYB561D2O14569 222 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 TUFMP49411 452 aaKnown RBP23.87■■□□□ 1.41
HDDC3-203ENST00000494993 NRLP54845 237 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 PPP2R5DQ14738 602 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 ARHGAP15Q53QZ3 475 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 GPR158Q5T848 1215 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 C1orf228Q6PIY5 440 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 CRELD2Q6UXH1 353 aaPredicted RBP23.87■■□□□ 1.41
HDDC3-203ENST00000494993 DYMQ7RTS9 669 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 METTL23Q86XA0 190 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 SECISBP2LQ93073 1101 aaKnown RBP23.87■■□□□ 1.41
HDDC3-203ENST00000494993 SEPT5Q99719 369 aaPredicted RBP23.87■■□□□ 1.41
HDDC3-203ENST00000494993 LPIN3Q9BQK8 851 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 PYM1Q9BRP8 204 aaKnown RBP23.87■■□□□ 1.41
HDDC3-203ENST00000494993 IKZF4Q9H2S9 585 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 C8orf33Q9H7E9 229 aaPredicted RBP23.87■■□□□ 1.41
HDDC3-203ENST00000494993 DLL3Q9NYJ7 618 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 STK17AQ9UEE5 414 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 CLIC4Q9Y696 253 aa23.87■■□□□ 1.41
HDDC3-203ENST00000494993 SLC38A8A6NNN8 435 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 DPYSL4O14531 572 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 PPP1R37O75864 691 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 KPNA1P52294 538 aaPredicted RBP23.86■■□□□ 1.41
HDDC3-203ENST00000494993 VEPH1Q14D04 833 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 PTPAQ15257 358 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 MGAT5BQ3V5L5 792 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 EFCAB13Q8IY85 973 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 THEM5Q8N1Q8 247 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 GPR161Q8N6U8 529 aaKnown RBP23.86■■□□□ 1.41
HDDC3-203ENST00000494993 FAM200AQ8TCP9 573 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 POMGNT1Q8WZA1 660 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 OBP2AQ9NY56 170 aa23.86■■□□□ 1.41
HDDC3-203ENST00000494993 ATF6P18850 670 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 ADSSP30520 456 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 SOX9P48436 509 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 CDR1P51861 262 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 SMARCB1Q12824 385 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 CUL4AQ13619 759 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 POSTNQ15063 836 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 ARHGAP29Q52LW3 1261 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 C2orf15Q8WU43 125 aaKnown RBP23.85■■□□□ 1.41
HDDC3-203ENST00000494993 LRRC3BQ96PB8 259 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 STRA6Q9BX79 667 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 SEL1LQ9UBV2 794 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 CCDC39Q9UFE4 941 aa23.85■■□□□ 1.41
HDDC3-203ENST00000494993 FBXO2Q9UK22 296 aaPredicted RBP23.85■■□□□ 1.41
HDDC3-203ENST00000494993 IL18RAPO95256 599 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 PRAMEF12O95522 483 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 WEE1P30291 646 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 CDC25CP30307 473 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 CYP4F8P98187 520 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 LRRC32Q14392 662 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 GAS6Q14393 721 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 SV2CQ496J9 727 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 WSCD1Q658N2 575 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 LRRTM3Q86VH5 581 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 NT5DC4Q86YG4 428 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 SPPL2BQ8TCT7 592 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 ZFYVE19Q96K21 471 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 TASP1Q9H6P5 420 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 MRPL44Q9H9J2 332 aaKnown RBP23.84■■□□□ 1.41
HDDC3-203ENST00000494993 IL21Q9HBE4 155 aa23.84■■□□□ 1.41
HDDC3-203ENST00000494993 SRPRBQ9Y5M8 271 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms