RNA–Protein interactions for RNA: ENST00000494917.6

CCDC180-206, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 2,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-206ENST00000494917 CXCL16Q9H2A7 254 aa11.7□□□□□ -0.54
CCDC180-206ENST00000494917 PRMT7Q9NVM4 692 aaPredicted RBP11.7□□□□□ -0.54
CCDC180-206ENST00000494917 NOVA2Q9UNW9 492 aaKnown RBP11.7□□□□□ -0.54
CCDC180-206ENST00000494917 GNEQ9Y223 722 aaKnown RBP11.7□□□□□ -0.54
CCDC180-206ENST00000494917 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
CCDC180-206ENST00000494917 TRIP11Q15643 1979 aa11.7□□□□□ -0.54
CCDC180-206ENST00000494917 MANSC4A6NHS7 340 aaPredicted RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 LACTBL1A8MY62 500 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 CCDC188H7C350 402 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 PGRMC1O00264 195 aaKnown RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 TMEM191BP0C7N4 346 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 UNGP13051 313 aaPredicted RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 HOXD8P13378 290 aaPredicted RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 ZNF200P98182 395 aaPredicted RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 ACAD10Q6JQN1 1059 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 RHOT2Q8IXI1 618 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 SYCE1Q8N0S2 351 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 RBBP8NLQ8NC74 664 aaPredicted RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 KDM4CQ9H3R0 1056 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 CNOT10Q9H9A5 744 aaKnown RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 RNF19AQ9NV58 838 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 TPX2Q9ULW0 747 aaKnown RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 NR2E1Q9Y466 385 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 A6NJR5 290 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 SART1O43290 800 aaKnown RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 KRT19P08727 400 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 GHRP10912 638 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 IBSPP21815 317 aaPredicted RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 BRD2P25440 801 aaKnown RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 GNA15P30679 374 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 MAGOHP61326 146 aaKnown RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 PPARDQ03181 441 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 KRT71Q3SY84 523 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 TLK2Q86UE8 772 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 DDX42Q86XP3 938 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 MAGOHBQ96A72 148 aaKnown RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 POLIQ9UNA4 740 aa11.69□□□□□ -0.54
CCDC180-206ENST00000494917 NOC2LQ9Y3T9 749 aaKnown RBP11.69□□□□□ -0.54
CCDC180-206ENST00000494917 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 ATP2C2O75185 946 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 DNAJC8O75937 253 aaPredicted RBP11.68□□□□□ -0.54
CCDC180-206ENST00000494917 RAP1GAPP47736 663 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 CRHR2Q13324 411 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 TRPC3Q13507 836 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 SPRED3Q2MJR0 410 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 JADE1Q6IE81 842 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 ZNF564Q8TBZ8 553 aaPredicted RBP11.68□□□□□ -0.54
CCDC180-206ENST00000494917 USP6NLQ92738 828 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 NFKBIZQ9BYH8 718 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 IMPG2Q9BZV3 1241 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 XYLT2Q9H1B5 865 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 RPF1Q9H9Y2 349 aaKnown RBP11.68□□□□□ -0.54
CCDC180-206ENST00000494917 SLC5A4Q9NY91 659 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 NXF1Q9UBU9 619 aaKnown RBP11.68□□□□□ -0.54
CCDC180-206ENST00000494917 CNOT8Q9UFF9 292 aaKnown RBP11.68□□□□□ -0.54
CCDC180-206ENST00000494917 SIX4Q9UIU6 781 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 GJD2Q9UKL4 321 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 THAP12O43422 761 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 TSPAN1O60635 241 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 CYP1A2P05177 515 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 SMIM10L2AP0DMW4 78 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 SMIM10L2BP0DMW5 78 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 COMTP21964 271 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 RRM1P23921 792 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 ORC1Q13415 861 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 LLGL1Q15334 1064 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 DAB2IPQ5VWQ8 1189 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 FAM228AQ86W67 206 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 CCDC26Q8TAB7 109 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 ZSWIM1Q9BR11 485 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.68□□□□□ -0.543e-6■■■■□ 22.3
CCDC180-206ENST00000494917 COL1A2P08123 1366 aa11.68□□□□□ -0.54
CCDC180-206ENST00000494917 FAM155AB1AL88 458 aaPredicted RBP11.67□□□□□ -0.54
CCDC180-206ENST00000494917 KRIT1O00522 736 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 B4GALT4O60513 344 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 GJB6O95452 261 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 FGGP02679 453 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 CDH8P55286 799 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 CRYMQ14894 314 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 E2F5Q15329 346 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 FAM187BQ17R55 369 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 SLC10A6Q3KNW5 377 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 MCOLN2Q8IZK6 566 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 CCT6BQ92526 530 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 CHMP6Q96FZ7 201 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 ARHGAP39Q9C0H5 1083 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 DDX47Q9H0S4 455 aaKnown RBP11.67□□□□□ -0.54
CCDC180-206ENST00000494917 NEUROG2Q9H2A3 272 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 CISHQ9NSE2 258 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 GTF3C4Q9UKN8 822 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 SLC10A3P09131 477 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 TBXAS1P24557 533 aaPredicted RBP11.67□□□□□ -0.54
CCDC180-206ENST00000494917 CLNS1AP54105 237 aaKnown RBP11.67□□□□□ -0.54
CCDC180-206ENST00000494917 EIF3BP55884 814 aaKnown RBP11.67□□□□□ -0.54
CCDC180-206ENST00000494917 POU5F1BQ06416 359 aa11.67□□□□□ -0.54
CCDC180-206ENST00000494917 BYSLQ13895 437 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms