RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 C8orf33Q9H7E9 229 aaPredicted RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 PARVGQ9HBI0 331 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 ABI2Q9NYB9 513 aaPredicted RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 KCND2Q9NZV8 630 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 TBX20Q9UMR3 447 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 CNOT1A5YKK6 2376 aaKnown RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 FGF19O95750 216 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 RETP07949 1114 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 CHRNB1P11230 501 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 CYP3A5P20815 502 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 CTHP32929 405 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 ACOT2P49753 483 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 EPHA5P54756 1037 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 NCKAP1LP55160 1127 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 LILRA4P59901 499 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 TNK2Q07912 1038 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 MYBPC2Q14324 1141 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 AASDHQ4L235 1098 aaPredicted RBP10.43□□□□□ -0.74
UBR4-216ENST00000494503 ARHGAP29Q52LW3 1261 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 ADALQ6DHV7 355 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 CENPPQ6IPU0 288 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 TXNDC11Q6PKC3 985 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 THEM5Q8N1Q8 247 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 SPEM1Q8N4L4 309 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 BPIFB1Q8TDL5 484 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 NELL1Q92832 810 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 PSMG2Q969U7 264 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 MSANTD3Q96H12 275 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 CHAMP1Q96JM3 812 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 TRPV4Q9HBA0 871 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 TRPV5Q9NQA5 729 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 THG1LQ9NWX6 298 aaKnown RBP10.43□□□□□ -0.74
UBR4-216ENST00000494503 ODF2LQ9ULJ1 636 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 MAGED2Q9UNF1 606 aaPredicted RBP10.43□□□□□ -0.74
UBR4-216ENST00000494503 ASB3Q9Y575 518 aa10.43□□□□□ -0.74
UBR4-216ENST00000494503 CYB561D2O14569 222 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 TRAK2O60296 914 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 VNN2O95498 520 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 PRAMEF12O95522 483 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 CCDC192P0DO97 292 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 TYMPP19971 482 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 GJB2P29033 226 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 CDC25CP30307 473 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 NMT1P30419 496 aaKnown RBP10.42□□□□□ -0.74
UBR4-216ENST00000494503 AVPR1AP37288 418 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 PXNP49023 591 aaPredicted RBP10.42□□□□□ -0.74
UBR4-216ENST00000494503 TUFMP49411 452 aaKnown RBP10.42□□□□□ -0.74
UBR4-216ENST00000494503 FCHO2Q0JRZ9 810 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 BFSP1Q12934 665 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 GAS6Q14393 721 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 MCM6Q14566 821 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 KARSQ15046 597 aaKnown RBP10.42□□□□□ -0.74
UBR4-216ENST00000494503 CCDC6Q16204 474 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 TMEM119Q4V9L6 283 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 PPM1JQ5JR12 505 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 DGKKQ5KSL6 1271 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 HYIQ5T013 277 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 SPATA1Q5VX52 437 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 C9orf57Q5W0N0 161 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 IL31Q6EBC2 164 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 PRR23CQ6ZRP0 262 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 GAREM2Q75VX8 874 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 LONP2Q86WA8 852 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 RALGPS2Q86X27 583 aaPredicted RBP10.42□□□□□ -0.74
UBR4-216ENST00000494503 C12orf50Q8NA57 414 aaPredicted RBP10.42□□□□□ -0.74
UBR4-216ENST00000494503 OR10T2Q8NGX3 314 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 NETO1Q8TDF5 533 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 SEMA4GQ9NTN9 838 aa10.42□□□□□ -0.74
UBR4-216ENST00000494503 MAP1BP46821 2468 aaKnown RBP10.42□□□□□ -0.74
UBR4-216ENST00000494503 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 MYBPHLA2RUH7 354 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 ARNTLO00327 626 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 AXIN1O15169 862 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 HRO43593 1189 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 TDGF1P13385 188 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 PLCG1P19174 1290 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 AARSP49588 968 aaKnown RBP eCLIP10.41□□□□□ -0.74
UBR4-216ENST00000494503 MCM2P49736 904 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 TAF6P49848 677 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 PLCB2Q00722 1185 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 PTPAQ15257 358 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 ZBTB6Q15916 424 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 ITPRIPL2Q3MIP1 535 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 ZC2HC1CQ53FD0 456 aaPredicted RBP10.41□□□□□ -0.74
UBR4-216ENST00000494503 ARSHQ5FYA8 562 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 ARL6IP4Q66PJ3 421 aaKnown RBP10.41□□□□□ -0.74
UBR4-216ENST00000494503 CC2D1AQ6P1N0 951 aaPredicted RBP10.41□□□□□ -0.74
UBR4-216ENST00000494503 CD302Q8IX05 232 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 ZNF687Q8N1G0 1237 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 MAB21L3Q8N8X9 362 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 KRI1Q8N9T8 703 aaKnown RBP10.41□□□□□ -0.74
UBR4-216ENST00000494503 STKLD1Q8NE28 680 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 POMGNT1Q8WZA1 660 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 AK8Q96MA6 479 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 LRRC3Q9BY71 257 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 TASP1Q9H6P5 420 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 TRPC7Q9HCX4 862 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 DPP3Q9NY33 737 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 DSEQ9UL01 958 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms