RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CRIPAKQ8N1N5 446 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 TMEM130Q8N3G9 435 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 MMGT1Q8N4V1 131 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 MSANTD4Q8NCY6 345 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 BEST2Q8NFU1 509 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 CAGE1Q8TC20 777 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 COG1Q8WTW3 980 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 CTNNBL1Q8WYA6 563 aaPredicted RBP7.24□□□□□ -1.25
MSH5-217ENST00000494458 RABGGTAQ92696 567 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 TMEM176AQ96HP8 235 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 PBKQ96KB5 322 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 GLT1D1Q96MS3 346 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 SCLT1Q96NL6 688 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 TWNKQ96RR1 684 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 CARD6Q9BX69 1037 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 ELOVL4Q9GZR5 314 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 CRISPLD2Q9H0B8 497 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.24□□□□□ -1.25
MSH5-217ENST00000494458 OSGEPQ9NPF4 335 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 FAM105AQ9NUU6 356 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 POLIQ9UNA4 740 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 HES2Q9Y543 173 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 NME7Q9Y5B8 376 aa7.24□□□□□ -1.25
MSH5-217ENST00000494458 MYH10P35580 1976 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 A0A0U1RQG5 324 aaPredicted RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 O00370 1275 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 SPTLC1O15269 473 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 EOMESO95936 686 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 CALCAP01258 141 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 TFRCP02786 760 aaKnown RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 VDRP11473 427 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 COL6A1P12109 1028 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 H2AFXP16104 143 aaPredicted RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 AKAP5P24588 427 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 CTNNA2P26232 953 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 RPL9P32969 192 aaKnown RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 THPOP40225 353 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 USP8P40818 1118 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 GPD2P43304 727 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 GUCY2FP51841 1108 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 CDH8P55286 799 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 LILRA4P59901 499 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 MYO1EQ12965 1108 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 MAMLD1Q13495 774 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 STILQ15468 1287 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 SOWAHAQ2M3V2 549 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 TAF3Q5VWG9 929 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 ARHGAP17Q68EM7 881 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 LCLAT1Q6UWP7 414 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 ANKRD33Q7Z3H0 272 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 RTN4RL1Q86UN2 441 aaPredicted RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 FAM126BQ8IXS8 530 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 TOP6BLQ8N6T0 577 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 GPR161Q8N6U8 529 aaKnown RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 DNAJC5GQ8N7S2 189 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 SPATA18Q8TC71 538 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 ACTRT1Q8TDG2 376 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 STK32AQ8WU08 396 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 KBTBD7Q8WVZ9 684 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 C18orf25Q96B23 403 aaPredicted RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 MMS19Q96T76 1030 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 SMYD3Q9H7B4 428 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 UBN1Q9NPG3 1134 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.23□□□□□ -1.25
MSH5-217ENST00000494458 RGS18Q9NS28 235 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 TRMT13Q9NUP7 481 aaKnown RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 SLC38A7Q9NVC3 462 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 MIOSQ9NXC5 875 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 TUBGCP4Q9UGJ1 667 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 LCMT1Q9UIC8 334 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 RAB21Q9UL25 225 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.23□□□□□ -1.25
MSH5-217ENST00000494458 GINS2Q9Y248 185 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 ALG6Q9Y672 507 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 PDCD11Q14690 1871 aaKnown RBP7.23□□□□□ -1.25
MSH5-217ENST00000494458 CITO14578 2027 aa7.23□□□□□ -1.25
MSH5-217ENST00000494458 CTAGE15A4D2H0 777 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TMEM191CA6NGB0 347 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 MEIS3P2A8K0S8 358 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 KPNA7A9QM74 516 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 MIF4GDA9UHW6 222 aaKnown RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 C9IYK1 514 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 PPEF2O14830 753 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 ZNF185O15231 689 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 MED7O43513 233 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 SRGAP2O75044 1071 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 FTCDO95954 541 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TUBBP07437 444 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 PFKMP08237 780 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 CTAGE8P0CG41 777 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 SKIP12755 728 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 ZSCAN20P17040 1043 aaPredicted RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 CAPN2P17655 700 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 WARSP23381 471 aaKnown RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 CD52P31358 61 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 MAN1A1P33908 653 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 SLC1A1P43005 524 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 CHMP4BP1P59074 171 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 ZNF268Q14587 947 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms