RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 TXLNAP40222 546 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 LIG4P49917 911 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 PPP2R3AQ06190 1150 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 MCL1Q07820 350 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 RAD51AP2Q09MP3 1159 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 TLR1Q15399 786 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 PABPC1LQ4VXU2 614 aaKnown RBP8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 AXDND1Q5T1B0 1012 aaPredicted RBP8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 SLC8B1Q6J4K2 584 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 CAVIN1Q6NZI2 390 aaKnown RBP8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 ALKAL1Q6UXT8 129 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 GRASPQ7Z6J2 395 aaPredicted RBP8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 NPAS3Q8IXF0 933 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 TMEM105Q8N8V8 129 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 C3orf58Q8NDZ4 430 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 APPL2Q8NEU8 664 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 FLCNQ8NFG4 579 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 FEZF2Q8TBJ5 459 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 ATOH1Q92858 354 aaPredicted RBP8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 TSPAN18Q96SJ8 248 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 REEP2Q9BRK0 252 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 CXCL16Q9H2A7 254 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 PLEKHA5Q9HAU0 1116 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 PARVGQ9HBI0 331 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 GOLGA2P5Q9HBQ8 144 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 POLD4Q9HCU8 107 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 WNT16Q9UBV4 365 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 CDH7Q9ULB5 785 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 POLIQ9UNA4 740 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 CDY1Q9Y6F8 540 aa8.75□□□□□ -1.01
DEPDC5-220ENST00000494065 WDFY4Q6ZS81 3184 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 TRIP11Q15643 1979 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ARHGEF37A1IGU5 675 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 SFI1A8K8P3 1242 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ANHXE9PGG2 379 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 PRRG1O14668 218 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ADAM12O43184 909 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 STAU1O95793 577 aaKnown RBP8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 PIGRP01833 764 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 LRG1P02750 347 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 CXCL8P10145 99 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 LAMP2P13473 410 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 PLCG1P19174 1290 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ELF1P32519 619 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 BRCC3P46736 316 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ZNF131P52739 623 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 UBE2HP62256 183 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ROR1Q01973 937 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 SOX4Q06945 474 aaPredicted RBP8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ZSCAN23Q3MJ62 389 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 TPGS2Q68CL5 300 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 CCDC105Q8IYK2 499 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ELMOD1Q8N336 334 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 LARP4BQ92615 738 aaKnown RBP8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 RAD54LQ92698 747 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 SUSD3Q96L08 255 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 PLIN2Q99541 437 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 OXCT2Q9BYC2 517 aaPredicted RBP8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 ARHGEF3Q9NR81 526 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 SLC2A4RGQ9NR83 387 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 STK17AQ9UEE5 414 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 MAFFQ9ULX9 164 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 UBQLN1Q9UMX0 589 aaKnown RBP8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 NUMBLQ9Y6R0 609 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 MYO10Q9HD67 2058 aa8.74□□□□□ -1.01
DEPDC5-220ENST00000494065 A6NJY4 79 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 I3L4J1 428 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 OGTO15294 1046 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 NARSO43776 548 aaKnown RBP8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 CYP3A5P20815 502 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 PAX3P23760 479 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 NASPP49321 788 aaPredicted RBP8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 EPHA4P54764 986 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 SEC13P55735 322 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 KRT85P78386 507 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 PFKPQ01813 784 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 CCDC173Q0VFZ6 552 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 PLD1Q13393 1074 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 SF3A1Q15459 793 aaKnown RBP8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 CTXN3Q4LDR2 81 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 CD300LGQ6UXG3 332 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 HAUS6Q7Z4H7 955 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 MAP4K3Q8IVH8 894 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 CD302Q8IX05 232 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 SLC44A3Q8N4M1 653 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 MYCT1Q8N699 235 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 LEMD2Q8NC56 503 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 RSAD2Q8WXG1 361 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 FGF13Q92913 245 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 C18orf25Q96B23 403 aaPredicted RBP8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 HVCN1Q96D96 273 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 TRIM44Q96DX7 344 aaPredicted RBP8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 SHDQ96IW2 340 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 ZMAT2Q96NC0 199 aaKnown RBP8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 MSTO1Q9BUK6 570 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 CCSER1Q9C0I3 900 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 RPF1Q9H9Y2 349 aaKnown RBP8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 TBC1D17Q9HA65 648 aa8.73□□□□□ -1.01
DEPDC5-220ENST00000494065 AVENQ9NQS1 362 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms