RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ZMYND12Q9H0C1 365 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 NDST4Q9H3R1 872 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 SLC2A4RGQ9NR83 387 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 ZSCAN32Q9NX65 697 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 TRIM10Q9UDY6 481 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 LRWD1Q9UFC0 647 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 ST3GAL5Q9UNP4 418 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 BZW2Q9Y6E2 419 aaKnown RBP11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 MYH9P35579 1960 aaKnown RBP11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 TRIM49BA6NDI0 452 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 CCDC188H7C350 402 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 LRP3O75074 770 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PPP1R37O75864 691 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 GFPT2O94808 682 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 FAM107AO95990 144 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PROS1P07225 676 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PAEPP09466 180 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 ASIC1P78348 528 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PDIA5Q14554 519 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 ASTE1Q2TB18 679 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PPP1R18Q6NYC8 613 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PDXDC1Q6P996 788 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 DCLRE1AQ6PJP8 1040 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 USP17L6PQ6QN14 398 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 SV2BQ7L1I2 683 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 CMTR1Q8N1G2 835 aaKnown RBP11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 CMASQ8NFW8 434 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 TMEM40Q8WWA1 233 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 ATP6V1G3Q96LB4 118 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PCYT2Q99447 389 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 LRRC1Q9BTT6 524 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 DDX23Q9BUQ8 820 aaKnown RBP11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 CDHR5Q9HBB8 845 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 C6orf50Q9HD87 102 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 PLCB1Q9NQ66 1216 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 AGPAT5Q9NUQ2 364 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 ARHGAP20Q9P2F6 1191 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 ITPR1Q14643 2758 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 DMXL2Q8TDJ6 3036 aa11.38□□□□□ -0.59
PDLIM1-205ENST00000493949 DOCK6Q96HP0 2047 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 MACROD2A1Z1Q3 448 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 CARNS1A5YM72 827 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 RCCD1A6NED2 376 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 WNT7AO00755 349 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 CHUKO15111 745 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 LAMTOR5O43504 91 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 PAPLNO95428 1278 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 MYBP10242 640 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 MYBL2P10244 700 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 PLCG1P19174 1290 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 NR1D1P20393 614 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 LSP1P33241 339 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 SMTNP53814 917 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 PMS1P54277 932 aaKnown RBP11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 AGBL2Q5U5Z8 902 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 ANKRD40Q6AI12 368 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 NEK8Q86SG6 692 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 NLRX1Q86UT6 975 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 VPS52Q8N1B4 723 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 DDX1Q92499 740 aaKnown RBP11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 GPRASP2Q96D09 838 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 TMEM169Q96HH4 297 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 SHDQ96IW2 340 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 CDHR1Q96JP9 859 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 OSBPL6Q9BZF3 934 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 FOXQ1Q9C009 403 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 WDR6Q9NNW5 1121 aaKnown RBP11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 PCDHA6Q9UN73 950 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 PCDHA8Q9Y5H6 950 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 CAPN6Q9Y6Q1 641 aa11.37□□□□□ -0.59
PDLIM1-205ENST00000493949 SOBPA7XYQ1 873 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 ZNF263O14978 683 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 SRGAP2O75044 1071 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 LRRN2O75325 713 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 GBP1P32455 592 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 EIF4A3P38919 411 aaKnown RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 EIF3BP55884 814 aaKnown RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 BCAR1P56945 870 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 NAB2Q15742 525 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 MTHFD1LQ6UB35 978 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 CACNA2D4Q7Z3S7 1137 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 DDX53Q86TM3 631 aaKnown RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 FAM228AQ86W67 206 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 BAP1Q92560 729 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 STAMQ92783 540 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 ZIM3Q96PE6 472 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 PPP1R16BQ96T49 567 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 TLR10Q9BXR5 811 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 FAM126AQ9BYI3 521 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 BCO2Q9BYV7 579 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 ISCUQ9H1K1 167 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 SLITRK6Q9H5Y7 841 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 RIOX1Q9H6W3 641 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms