RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 VNN2O95498 520 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 CXCL8P10145 99 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 MCF2P10911 925 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 PLS3P13797 630 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 KCNE1P15382 129 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 SYT1P21579 422 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 DMP1Q13316 513 aaPredicted RBP8.82□□□□□ -1
HDAC6-234ENST00000493923 RAB33AQ14088 237 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 MCM6Q14566 821 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 KARSQ15046 597 aaKnown RBP8.82□□□□□ -1
HDAC6-234ENST00000493923 SLC5A9Q2M3M2 681 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 RILPL1Q5EBL4 403 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 SPECC1Q5M775 1068 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 MPZL3Q6UWV2 235 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 CEP112Q8N8E3 955 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 GPR152Q8TDT2 470 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 SPIRE2Q8WWL2 714 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 ING5Q8WYH8 240 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 TCEAL4Q96EI5 215 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 REEP2Q9BRK0 252 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 NTPCRQ9BSD7 190 aaKnown RBP8.82□□□□□ -1
HDAC6-234ENST00000493923 FUT8Q9BYC5 575 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 PIDD1Q9HB75 910 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 ANO10Q9NW15 660 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 CNTN3Q9P232 1028 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 ANKFY1Q9P2R3 1169 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 CLIC4Q9Y696 253 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 NUMBLQ9Y6R0 609 aa8.82□□□□□ -1
HDAC6-234ENST00000493923 WDR27A2RRH5 827 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 ANKRD63C9JTQ0 380 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 H3BQV1 296 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 CHUKO15111 745 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 C1RP00736 705 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 GLULP15104 373 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 PLCG1P19174 1290 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 FSHRP23945 695 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 NMT1P30419 496 aaKnown RBP8.81□□□□□ -1
HDAC6-234ENST00000493923 ELF1P32519 619 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 TXLNAP40222 546 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 CCR2P41597 374 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 CDR1P51861 262 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 NCKAP1LP55160 1127 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 ROR1Q01973 937 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 MCL1Q07820 350 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 MRPL58Q14197 206 aaKnown RBP8.81□□□□□ -1
HDAC6-234ENST00000493923 PTPAQ15257 358 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 MAP9Q49MG5 647 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 PPM1LQ5SGD2 360 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 VARS2Q5ST30 1063 aaKnown RBP8.81□□□□□ -1
HDAC6-234ENST00000493923 LARP1BQ659C4 914 aaKnown RBP8.81□□□□□ -1
HDAC6-234ENST00000493923 SCARA3Q6AZY7 606 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 ASCL5Q7RTU5 278 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 GPBP1Q86WP2 473 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 CEP57L1Q8IYX8 460 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 ZSWIM2Q8NEG5 633 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 ATOH1Q92858 354 aaPredicted RBP8.81□□□□□ -1
HDAC6-234ENST00000493923 EPSTI1Q96J88 318 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 CABS1Q96KC9 395 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 FAM84AQ96KN4 292 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 ACAP3Q96P50 834 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 TCHPQ9BT92 498 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 RAB34Q9BZG1 259 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 PLA2G2FQ9BZM2 168 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 VIPAS39Q9H9C1 493 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 VPS18Q9P253 973 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 IGSF9Q9P2J2 1179 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 POLIQ9UNA4 740 aa8.81□□□□□ -1
HDAC6-234ENST00000493923 TIMM13Q9Y5L4 95 aaPredicted RBP8.81□□□□□ -1
HDAC6-234ENST00000493923 DMXL1Q9Y485 3027 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 NCANO14594 1321 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 TTC26A0AVF1 554 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 SHISA7A6NL88 538 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 USP27XA6NNY8 438 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 LACTBL1A8MY62 500 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 EBAG9O00559 213 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 CBFA2T2O43439 604 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 MOSPD3O75425 235 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 TOM1L1O75674 476 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 ABLIM3O94929 683 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 HNRNPA1P09651 372 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC6-234ENST00000493923 OR4Q2P0C623 313 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 CEBPBP17676 345 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 AOC1P19801 751 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 MARCKSP29966 332 aaPredicted RBP8.8□□□□□ -1
HDAC6-234ENST00000493923 HNRNPH1P31943 449 aaKnown RBP8.8□□□□□ -1
HDAC6-234ENST00000493923 ARPP19P56211 112 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 WNT7BP56706 349 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 GPC5P78333 572 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 CREMQ03060 361 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 ELAVL2Q12926 359 aaKnown RBP8.8□□□□□ -1
HDAC6-234ENST00000493923 RESTQ13127 1097 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 SF3A1Q15459 793 aaKnown RBP8.8□□□□□ -1
HDAC6-234ENST00000493923 ZBTB6Q15916 424 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 ENOX2Q16206 610 aaKnown RBP8.8□□□□□ -1
HDAC6-234ENST00000493923 E2F4Q16254 413 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 LONRF2Q1L5Z9 754 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 ZC2HC1CQ53FD0 456 aaPredicted RBP8.8□□□□□ -1
HDAC6-234ENST00000493923 LIN9Q5TKA1 542 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 AP1ARQ63HQ0 302 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms