RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 MC2RQ01718 297 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 FOXI1Q12951 378 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 NBPF8Q3BBV2 869 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 MINDY4Q4G0A6 757 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 ANO6Q4KMQ2 910 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 CRB2Q5IJ48 1285 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 VWA1Q6PCB0 445 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 OVCH2Q7RTZ1 564 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 FAM109AQ8N4B1 249 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 SNX19Q92543 992 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 TNPO1Q92973 898 aaKnown RBP5.48□□□□□ -1.53
ITGB1-216ENST00000493758 MRGPRX1Q96LB2 322 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 Q96MF0 132 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 C1orf112Q9NSG2 853 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 TCEAL9Q9UHQ7 104 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 DMTF1Q9Y222 760 aa5.48□□□□□ -1.53
ITGB1-216ENST00000493758 H3BUI4 141 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 POLRMTO00411 1230 aaKnown RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 FRS3O43559 492 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 TOB1P50616 345 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 PSMC1P62191 440 aaKnown RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 GPSM2P81274 684 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 LRRC41Q15345 812 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 PRIMA1Q86XR5 153 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 KIAA0319LQ8IZA0 1049 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 CAMKK1Q8N5S9 505 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 ZBTB34Q8NCN2 500 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 PSD4Q8NDX1 1056 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 KBTBD7Q8WVZ9 684 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 TMEM125Q96AQ2 219 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 PTCD3Q96EY7 689 aaKnown RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 HEPHQ9BQS7 1158 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 DPH1Q9BZG8 443 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 SARS2Q9NP81 518 aaKnown RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 RGS17Q9UGC6 210 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 TESQ9UGI8 421 aaKnown RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-216ENST00000493758 PAXBP1Q9Y5B6 917 aa5.47□□□□□ -1.53
ITGB1-216ENST00000493758 WDR27A2RRH5 827 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 TOR1BO14657 336 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 PRPF3O43395 683 aaKnown RBP5.46□□□□□ -1.54
ITGB1-216ENST00000493758 DNAJB5O75953 348 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 AHSGP02765 367 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 HRGP04196 525 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 VIPR2P41587 438 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 SOX8P57073 446 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 FGL2Q14314 439 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 PRR16Q569H4 304 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 FAM160B1Q5W0V3 765 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 DAAM2Q86T65 1068 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 PDLIM2Q96JY6 352 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 AIFM2Q9BRQ8 373 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 RSAD1Q9HA92 442 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 AGAP1Q9UPQ3 857 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 PLEKHM1Q9Y4G2 1056 aa5.46□□□□□ -1.54
ITGB1-216ENST00000493758 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 MPPED1O15442 326 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 FOLR3P41439 243 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 NPTX2P47972 431 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 FPGSQ05932 587 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 ITIH3Q06033 890 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 EXOSC9Q06265 439 aaKnown RBP5.45□□□□□ -1.54
ITGB1-216ENST00000493758 GBX1Q14549 363 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 PTPRRQ15256 657 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 SMN1Q16637 294 aaKnown RBP5.45□□□□□ -1.54
ITGB1-216ENST00000493758 PREPLQ4J6C6 727 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-216ENST00000493758 CCDC157Q569K6 752 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 USP37Q86T82 979 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 FAM9AQ8IZU1 332 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-216ENST00000493758 SLC44A3Q8N4M1 653 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 CAVIN3Q969G5 261 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 SPATA5L1Q9BVQ7 753 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 TRIM54Q9BYV2 358 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 CASS4Q9NQ75 786 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 PIH1D1Q9NWS0 290 aaKnown RBP5.45□□□□□ -1.54
ITGB1-216ENST00000493758 FOXJ2Q9P0K8 574 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 HESX1Q9UBX0 185 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 PCDHA1Q9Y5I3 950 aa5.45□□□□□ -1.54
ITGB1-216ENST00000493758 A0A0B4J269 797 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 CCDC151A5D8V7 595 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 PHGDHO43175 533 aaKnown RBP5.44□□□□□ -1.54
ITGB1-216ENST00000493758 THP07101 528 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 GATA3P23771 443 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 NDUFV1P49821 464 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 WNT3P56703 355 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 NXPH1P58417 271 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 FSTL1Q12841 308 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 TUBB3Q13509 450 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 ZNF169Q14929 603 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-216ENST00000493758 SF3B3Q15393 1217 aaKnown RBP5.44□□□□□ -1.54
ITGB1-216ENST00000493758 KHDC1LQ5JSQ8 128 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 TAF2Q6P1X5 1199 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 OLFML1Q6UWY5 402 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 CHST15Q7LFX5 561 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-216ENST00000493758 SH2D3CQ8N5H7 860 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 PPP1R35Q8TAP8 253 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 PGBD1Q96JS3 809 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 LRGUKQ96M69 825 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 B3GNT5Q9BYG0 378 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms