RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 BRD9Q9H8M2 597 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 MKS1Q9NXB0 559 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 WDR27A2RRH5 827 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 ZNF785A8K8V0 405 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 MMP13P45452 471 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 MASP1P48740 699 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 PLCD1P51178 756 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 FHL1Q13642 323 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 RAB39AQ14964 217 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 PRAMEF17Q5VTA0 474 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 MORN5Q5VZ52 161 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 RNF219Q5W0B1 726 aaPredicted RBP5.59□□□□□ -1.51
SMC4-223ENST00000493695 PPP4R3AQ6IN85 833 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 SLC18B1Q6NT16 456 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 SLC2A7Q6PXP3 512 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 ZNF551Q7Z340 670 aaPredicted RBP5.59□□□□□ -1.51
SMC4-223ENST00000493695 KAT5Q92993 513 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 ZNF48Q96MX3 618 aaPredicted RBP5.59□□□□□ -1.51
SMC4-223ENST00000493695 SEMA4CQ9C0C4 833 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 SMOC2Q9H3U7 446 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 MAN1C1Q9NR34 630 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 ARHGEF3Q9NR81 526 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 ZNF277Q9NRM2 450 aaPredicted RBP5.59□□□□□ -1.51
SMC4-223ENST00000493695 SERGEFQ9UGK8 458 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 PCDHB1Q9Y5F3 818 aa5.59□□□□□ -1.51
SMC4-223ENST00000493695 QSOX1O00391 747 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 XPOTO43592 962 aaKnown RBP5.58□□□□□ -1.52
SMC4-223ENST00000493695 JTBO76095 146 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 SMARCA1P28370 1054 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 CD6P30203 668 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 ALDH9A1P49189 494 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 ERVK-21P61565 698 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 SSBP2P81877 361 aaPredicted RBP5.58□□□□□ -1.52
SMC4-223ENST00000493695 SUPT20HL1Q3ZLR7 823 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 CCDC93Q567U6 631 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 RBM20Q5T481 1227 aaKnown RBP5.58□□□□□ -1.52
SMC4-223ENST00000493695 ZNF66Q6ZN08 573 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 NOP9Q86U38 636 aaKnown RBP5.58□□□□□ -1.52
SMC4-223ENST00000493695 PSD4Q8NDX1 1056 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 ATRIPQ8WXE1 791 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 VRK1Q99986 396 aaPredicted RBP5.58□□□□□ -1.52
SMC4-223ENST00000493695 ANLNQ9NQW6 1124 aa5.58□□□□□ -1.52
SMC4-223ENST00000493695 E9PLN8 166 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 PPP6CO00743 305 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 NXPH3O95157 252 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 EYA4O95677 639 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 ANXA1P04083 346 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 RPLP2P05387 115 aaKnown RBP5.57□□□□□ -1.52
SMC4-223ENST00000493695 PHKA1P46020 1223 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 ZNF135P52742 658 aaPredicted RBP5.57□□□□□ -1.52
SMC4-223ENST00000493695 CEP78Q5JTW2 689 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 TAF2Q6P1X5 1199 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 POC1BQ8TC44 478 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 SSH1Q8WYL5 1049 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 SCAMP4Q969E2 229 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 FAM136AQ96C01 138 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 VKORC1Q9BQB6 163 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 AMBRA1Q9C0C7 1298 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.57□□□□□ -1.52
SMC4-223ENST00000493695 BTBD3Q9Y2F9 522 aa5.57□□□□□ -1.52
SMC4-223ENST00000493695 FNDC1Q4ZHG4 1894 aaPredicted RBP5.57□□□□□ -1.52
SMC4-223ENST00000493695 SPATA31A3Q5VYP0 1347 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 CCDC154A6NI56 674 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 KCNU1A8MYU2 1149 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 TRIM38O00635 465 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 SGTAO43765 313 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 PDHA1P08559 390 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 CYP2C18P33260 490 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 ARHGAP25P42331 645 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 WASP42768 502 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 POLGP54098 1239 aaPredicted RBP5.56□□□□□ -1.52
SMC4-223ENST00000493695 KIF23Q02241 960 aaPredicted RBP5.56□□□□□ -1.52
SMC4-223ENST00000493695 TLE1Q04724 770 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 PROSER3Q2NL68 480 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 C3orf36Q3SXR2 165 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 TMPRSS9Q7Z410 1059 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 JADE3Q92613 823 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 SERTAD4Q9NUC0 356 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 GNL3LQ9NVN8 582 aaKnown RBP5.56□□□□□ -1.52
SMC4-223ENST00000493695 ELOVL5Q9NYP7 299 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 TUBD1Q9UJT1 453 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 LIMCH1Q9UPQ0 1083 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 TBX22Q9Y458 520 aa5.56□□□□□ -1.52
SMC4-223ENST00000493695 MOSPD3O75425 235 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 CLSTN1O94985 981 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 MT-CO1P00395 513 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 GJB1P08034 283 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 C5AR1P21730 350 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 KHDC1Q4VXA5 237 aaKnown RBP5.55□□□□□ -1.52
SMC4-223ENST00000493695 KLHDC4Q8TBB5 520 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 OSBPL9Q96SU4 736 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 CNPPD1Q9BV87 410 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 CALCOCO1Q9P1Z2 691 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMC4-223ENST00000493695 RAD54BQ9Y620 910 aa5.55□□□□□ -1.52
SMC4-223ENST00000493695 PPEF2O14830 753 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 PPM1DO15297 605 aa5.54□□□□□ -1.52
SMC4-223ENST00000493695 HTRA2O43464 458 aaPredicted RBP5.54□□□□□ -1.52
SMC4-223ENST00000493695 NHLRC4P0CG21 123 aaPredicted RBP5.54□□□□□ -1.52
SMC4-223ENST00000493695 IARSP41252 1262 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms