RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ST3GAL1Q11201 340 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 ZBTB6Q15916 424 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 STPG1Q5TH74 334 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 ARMCX5Q6P1M9 558 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 GPIHBP1Q8IV16 184 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 ATAD1Q8NBU5 361 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 GCNAQ96QF7 691 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 TSPAN18Q96SJ8 248 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 TMEM209Q96SK2 561 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 TASP1Q9H6P5 420 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 SLC27A5Q9Y2P5 690 aa19.2■□□□□ 0.66
NUP50-218ENST00000493456 EXTL3O43909 919 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 PRAMEF12O95522 483 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 CCDC192P0DO97 292 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 ODC1P11926 461 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 CDC25CP30307 473 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 MATR3P43243 847 aaKnown RBP eCLIP19.19■□□□□ 0.66
NUP50-218ENST00000493456 CACNB1Q02641 598 aaPredicted RBP19.19■□□□□ 0.66
NUP50-218ENST00000493456 TNK2Q07912 1038 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 VEPH1Q14D04 833 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 KYAT1Q16773 422 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 PLA2G2CQ5R387 149 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 FBXO18Q8NFZ0 1043 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 SLC8A2Q9UPR5 921 aa19.19■□□□□ 0.66
NUP50-218ENST00000493456 SFI1A8K8P3 1242 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 H0YCG3 227 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 LAD1O00515 517 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 TUFMP49411 452 aaKnown RBP19.18■□□□□ 0.66
NUP50-218ENST00000493456 NEK4P51957 841 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 SPAG1Q07617 926 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 GRSF1Q12849 480 aaKnown RBP eCLIP19.18■□□□□ 0.66
NUP50-218ENST00000493456 NBR1Q14596 966 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 KBTBD6Q86V97 674 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 TTC9BQ8N6N2 239 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 ZC3H10Q96K80 434 aaKnown RBP19.18■□□□□ 0.66
NUP50-218ENST00000493456 RXFP3Q9NSD7 469 aa19.18■□□□□ 0.66
NUP50-218ENST00000493456 KIF26AQ9ULI4 1882 aaPredicted RBP19.18■□□□□ 0.66
NUP50-218ENST00000493456 SPAG17Q6Q759 2223 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 HOXC13P31276 330 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 MPLP40238 635 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 LILRA4P59901 499 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 CCDC6Q16204 474 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 TMEM196Q5HYL7 178 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 TMEM130Q8N3G9 435 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 CAMKK1Q8N5S9 505 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 KCTD17Q8N5Z5 321 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 BICD1Q96G01 975 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 LLPHQ9BRT6 129 aaKnown RBP19.17■□□□□ 0.66
NUP50-218ENST00000493456 LSM14BQ9BX40 385 aaKnown RBP19.17■□□□□ 0.66
NUP50-218ENST00000493456 HAPLN2Q9GZV7 340 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 VPS45Q9NRW7 570 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 KCND2Q9NZV8 630 aa19.17■□□□□ 0.66
NUP50-218ENST00000493456 PP2D1A8MPX8 630 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 LACTBL1A8MY62 500 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 SOAT2O75908 522 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 KCNK5O95279 499 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 PRPHP41219 470 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 PXNP49023 591 aaPredicted RBP19.16■□□□□ 0.66
NUP50-218ENST00000493456 CYP4F8P98187 520 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 AMPD2Q01433 879 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 PKN3Q6P5Z2 889 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 KCNK18Q7Z418 384 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 KCNN1Q92952 543 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 SENP8Q96LD8 212 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 SEPT5Q99719 369 aaPredicted RBP19.16■□□□□ 0.66
NUP50-218ENST00000493456 LPIN3Q9BQK8 851 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 FAM83CQ9BQN1 747 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 IL21Q9HBE4 155 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 TSC2P49815 1807 aa19.16■□□□□ 0.66
NUP50-218ENST00000493456 TRDMT1O14717 391 aaKnown RBP19.15■□□□□ 0.66
NUP50-218ENST00000493456 CYP11A1P05108 521 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 ADRB2P07550 413 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 SCP2P22307 547 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 DDX6P26196 483 aaKnown RBP eCLIP19.15■□□□□ 0.66
NUP50-218ENST00000493456 TNFSF9P41273 254 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 HMGN5P82970 282 aaKnown RBP19.15■□□□□ 0.66
NUP50-218ENST00000493456 RAD51AP2Q09MP3 1159 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 SMARCB1Q12824 385 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 RUNX3Q13761 415 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 ENOX2Q16206 610 aaKnown RBP19.15■□□□□ 0.66
NUP50-218ENST00000493456 TAF12Q16514 161 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 MGAT5BQ3V5L5 792 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 SLC39A12Q504Y0 691 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 SPATA1Q5VX52 437 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 FSTL4Q6MZW2 842 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 DTHD1Q6ZMT9 781 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 CD302Q8IX05 232 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 CMTM8Q8IZV2 173 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 OR10T2Q8NGX3 314 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 C2orf15Q8WU43 125 aaKnown RBP19.15■□□□□ 0.66
NUP50-218ENST00000493456 MMTAG2Q9BU76 263 aaKnown RBP19.15■□□□□ 0.66
NUP50-218ENST00000493456 RPF1Q9H9Y2 349 aaKnown RBP19.15■□□□□ 0.66
NUP50-218ENST00000493456 KIF9Q9HAQ2 790 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 GKN1Q9NS71 199 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 LARSQ9P2J5 1176 aaKnown RBP19.15■□□□□ 0.66
NUP50-218ENST00000493456 DSEQ9UL01 958 aa19.15■□□□□ 0.66
NUP50-218ENST00000493456 FAM208BQ5VWN6 2430 aa19.14■□□□□ 0.66
NUP50-218ENST00000493456 PROS1P07225 676 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 ATF6P18850 670 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 U2AF2P26368 475 aaKnown RBP eCLIP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms