RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 SOX9P48436 509 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 GRSF1Q12849 480 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 SRSF5Q13243 272 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 PON2Q15165 354 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 GPR158Q5T848 1215 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 HEATR6Q6AI08 1181 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 DTHD1Q6ZMT9 781 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 GAREM2Q75VX8 874 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 FAM184AQ8NB25 1140 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 ZBTB45Q96K62 511 aaPredicted RBP11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 TMEM209Q96SK2 561 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 KIF9Q9HAQ2 790 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 GTSE1Q9NYZ3 720 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 LIMCH1Q9UPQ0 1083 aa11.94□□□□□ -0.5
SNRNP200-207ENST00000493271 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 TM4SF5O14894 197 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 CYP11A1P05108 521 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 ADRB2P07550 413 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 OR4Q2P0C623 313 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 U2AF2P26368 475 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 KARSQ15046 597 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 TAF12Q16514 161 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 FBXO43Q4G163 708 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 WDR44Q5JSH3 913 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 HYIQ5T013 277 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 SPATA1Q5VX52 437 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 SYT2Q8N9I0 419 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 ATAD1Q8NBU5 361 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 CCDC26Q8TAB7 109 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 SPPL2BQ8TCT7 592 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 BICD1Q96G01 975 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 ZC3H10Q96K80 434 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 ARRDC1-AS1Q9H2J1 176 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 CRISPLD1Q9H336 500 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 RPF1Q9H9Y2 349 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 VPS45Q9NRW7 570 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 SLC8A2Q9UPR5 921 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 SLC27A5Q9Y2P5 690 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 DERAQ9Y315 318 aa11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 TIMM13Q9Y5L4 95 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-207ENST00000493271 GREB1Q4ZG55 1949 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 TRDMT1O14717 391 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 AXIN1O15169 862 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 OGTO15294 1046 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 SLC26A4O43511 780 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 PIGRP01833 764 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 CCDC192P0DO97 292 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 LIG4P49917 911 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 NCKAP1LP55160 1127 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 LILRA4P59901 499 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 ST3GAL1Q11201 340 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 RUNX3Q13761 415 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 SEZ6Q53EL9 994 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 TMEM196Q5HYL7 178 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 PLA2G2CQ5R387 149 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 STXBP5Q5T5C0 1151 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 C11orf74Q86VG3 221 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 METTL23Q86XA0 190 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 THEM5Q8N1Q8 247 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 ZFYVE19Q96K21 471 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 SENP8Q96LD8 212 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 ZSCAN31Q96LW9 406 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 LRRC3BQ96PB8 259 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 FAM83CQ9BQN1 747 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 ODF2LQ9ULJ1 636 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 USP24Q9UPU5 2620 aa11.92□□□□□ -0.5
SNRNP200-207ENST00000493271 RALGAPA1Q6GYQ0 2036 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 SFI1A8K8P3 1242 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 LACTBL1A8MY62 500 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 HNRNPDLO14979 420 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 PRAMEF12O95522 483 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 DRD1P21728 446 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 KCNA4P22459 653 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 CDC25AP30304 524 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 AVPR1AP37288 418 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 ELF2Q15723 593 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 MGAT5BQ3V5L5 792 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 N4BP2L1Q5TBK1 243 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 STPG1Q5TH74 334 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 CCDC83Q8IWF9 413 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 CMTM8Q8IZV2 173 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 CDK5RAP3Q96JB5 506 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 SEPT5Q99719 369 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 ZCWPW1Q9H0M4 648 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 ASB7Q9H672 318 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 IL21Q9HBE4 155 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 KIF3AQ9Y496 699 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 PCDHB6Q9Y5E3 794 aa11.91□□□□□ -0.5
SNRNP200-207ENST00000493271 CHD6Q8TD26 2715 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 ANO9A1A5B4 782 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 PP2D1A8MPX8 630 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 PIRO00625 290 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 EXTL3O43909 919 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 FAM189A1O60320 539 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 RHOBTB1O94844 696 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 ATF6P18850 670 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 MPLP40238 635 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms