RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CDH8P55286 799 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 RWDD2BP57060 319 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 PRKCZQ05513 592 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 SEL1L2Q5TEA6 688 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 RSPH3Q86UC2 560 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 KLHL7Q8IXQ5 586 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 BEST2Q8NFU1 509 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 WHAMMQ8TF30 809 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 TMEM176AQ96HP8 235 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 PLVAPQ9BX97 442 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 CELF4Q9BZC1 486 aaKnown RBP14.92□□□□□ -0.02
PTPN7-216ENST00000492977 CRISPLD2Q9H0B8 497 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 SMYD3Q9H7B4 428 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 GDF3Q9NR23 364 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 GTF2IRD1Q9UHL9 959 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 PIN4Q9Y237 131 aaKnown RBP14.92□□□□□ -0.02
PTPN7-216ENST00000492977 TRIP11Q15643 1979 aa14.92□□□□□ -0.02
PTPN7-216ENST00000492977 M0QZ92 97 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 SART1O43290 800 aaKnown RBP14.91□□□□□ -0.02
PTPN7-216ENST00000492977 PROSCO94903 275 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 HEXIM1O94992 359 aaKnown RBP14.91□□□□□ -0.02
PTPN7-216ENST00000492977 PGK1P00558 417 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 CD19P15391 556 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 GUCY2FP51841 1108 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 SP3Q02447 781 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 TAP1Q03518 808 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 CACNB2Q08289 660 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-216ENST00000492977 INCA1Q0VD86 236 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 NBPF20Q3BBV1 942 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 LRRC52Q8N7C0 313 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 EIF1ADQ8N9N8 165 aaKnown RBP14.91□□□□□ -0.02
PTPN7-216ENST00000492977 SLC4A11Q8NBS3 891 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 CCDC26Q8TAB7 109 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 FEZF2Q8TBJ5 459 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 KIAA1257Q9ULG3 409 aa14.91□□□□□ -0.02
PTPN7-216ENST00000492977 BARX2Q9UMQ3 279 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-216ENST00000492977 RAD51CO43502 376 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 RECQL4O94761 1208 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 TOMM70O94826 608 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 GLI1P08151 1106 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 VDRP11473 427 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 ITGA4P13612 1032 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 MAN1A1P33908 653 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 MARCKSL1P49006 195 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 MRPS6P82932 125 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 PTPN11Q06124 597 aaPredicted RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 ZNF211Q13398 564 aaPredicted RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 CASP8Q14790 479 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 C2CD6Q53TS8 623 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 XKR4Q5GH76 650 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 UBXN11Q5T124 520 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 CXCL17Q6UXB2 119 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 MAATS1Q7Z4T9 603 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 ERICH1Q86X53 443 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 WDTC1Q8N5D0 677 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 C1orf131Q8NDD1 294 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 AENQ8WTP8 325 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 ZMAT2Q96NC0 199 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 ELOVL4Q9GZR5 314 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 NXF3Q9H4D5 531 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 VIPAS39Q9H9C1 493 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 STRIP2Q9ULQ0 834 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 UBQLN1Q9UMX0 589 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 TLR3O15455 904 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 XPOTO43592 962 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 ADAMTS4O75173 837 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 CD4P01730 458 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 MYBL2P10244 700 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 PYGMP11217 842 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 KCNE1P15382 129 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 PLA2G4AP47712 749 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 EPHB4P54760 987 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 MRPS25P82663 173 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 GUCY2DQ02846 1103 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 CNGA2Q16280 664 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 DEFB115Q30KQ5 88 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 RPAINQ86UA6 219 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 SESTD1Q86VW0 696 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 TMEM130Q8N3G9 435 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 DDX27Q96GQ7 796 aaKnown RBP14.9□□□□□ -0.02
PTPN7-216ENST00000492977 CFHR5Q9BXR6 569 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 TRIM7Q9C029 511 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 EPB41L5Q9HCM4 733 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 XPNPEP3Q9NQH7 507 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 IP6K2Q9UHH9 426 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 HES2Q9Y543 173 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 TRPV2Q9Y5S1 764 aa14.9□□□□□ -0.02
PTPN7-216ENST00000492977 A0A0U1RQG5 324 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-216ENST00000492977 TCRBV5S1A1TA0A578 114 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 TMEM191CA6NGB0 347 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 BHMG1C9JSJ3 638 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-216ENST00000492977 AOC2O75106 756 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 HMGCRP04035 888 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 ATF7P17544 494 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-216ENST00000492977 CST5P28325 142 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-216ENST00000492977 TRIM32Q13049 653 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms