RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
CACNA1C-228ENST00000492150 GOLGA4Q13439 2230 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 TRIP11Q15643 1979 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 SMIM28A0A1B0GU29 152 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 BTBD18B2RXH4 712 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 B8ZZF3 427 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 TRAPPC3O43617 180 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 SEC24AO95486 1093 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 APBB3O95704 486 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 LRG1P02750 347 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 CYP11B2P19099 503 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 VIPR2P41587 438 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 NAMPTP43490 491 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 TOGARAM2Q6ZUX3 1019 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 TCEAL8Q8IYN2 117 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 WASF1Q92558 559 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 PIGKQ92643 395 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 ZSWIM3Q96MP5 696 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 UROC1Q96N76 676 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 FCRL3Q96P31 734 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 HHIPQ96QV1 700 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 NACC1Q96RE7 527 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 POLR3CQ9BUI4 534 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 POLD4Q9HCU8 107 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 POLMQ9NP87 494 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 KIAA1522Q9P206 1035 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 KIAA1549LQ6ZVL6 1849 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 PTPRDP23468 1912 aa12.82□□□□□ -0.36
CACNA1C-228ENST00000492150 GON4LQ3T8J9 2241 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 NUP210Q8TEM1 1887 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 ERVH48-1M5A8F1 160 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 PRRG1O14668 218 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 OPHN1O60890 802 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 MOSPD3O75425 235 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 CD59P13987 128 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 ATF2P15336 505 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 ELF1P32519 619 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 HOXD12P35452 270 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 SLC14A1Q13336 389 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 MRPL58Q14197 206 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 XKR4Q5GH76 650 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 ATF7IP2Q5U623 682 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 PEAR1Q5VY43 1037 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 ALKAL1Q6UXT8 129 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 GLRX5Q86SX6 157 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 YAF2Q8IY57 180 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 HS6ST3Q8IZP7 471 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 DEPTORQ8TB45 409 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 ZSCAN18Q8TBC5 510 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 MBD1Q9UIS9 605 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 INSL5Q9Y5Q6 135 aa12.81□□□□□ -0.36
CACNA1C-228ENST00000492150 PLXND1Q9Y4D7 1925 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 E9PAM4 449 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 TNFRSF10BO14763 440 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 ATXN3P54252 364 aaPredicted RBP12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 ARPP19P56211 112 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 USP39Q53GS9 565 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 COLEC12Q5KU26 742 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 PDZD4Q76G19 769 aaPredicted RBP12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 SYT13Q7L8C5 426 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 GPR155Q7Z3F1 870 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 SYT12Q8IV01 421 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 DIS3L2Q8IYB7 885 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 PNPLA1Q8N8W4 532 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 CEP120Q8N960 986 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 ZMAT2Q96NC0 199 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 PI4K2AQ9BTU6 479 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 GPR88Q9GZN0 384 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 CYP4F11Q9HBI6 524 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 DNAAF2Q9NVR5 837 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 MYO16Q9Y6X6 1858 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 MGAQ8IWI9 3026 aa12.8□□□□□ -0.36
CACNA1C-228ENST00000492150 UBR5O95071 2799 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 ARHGEF35A5YM69 484 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 TRABD2BA6NFA1 517 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 ENO4A6NNW6 628 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 PODXLO00592 558 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 SYN3O14994 580 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 RPA1P27694 616 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 ITPKBP27987 946 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 GRM5P41594 1212 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 DHPSP49366 369 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 EFNA5P52803 228 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 CAMK2BQ13554 666 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 PPP2R5AQ15172 486 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 ARHGAP29Q52LW3 1261 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 TPGS2Q68CL5 300 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 LEMD2Q8NC56 503 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 DCBLD2Q96PD2 775 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 CDT1Q9H211 546 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 GTSE1Q9NYZ3 720 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms