RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 MICAL2O94851 1124 aa33.81■■■■□ 3
LDB1-204ENST00000490751 TMEM191BP0C7N4 346 aa33.81■■■■□ 3
LDB1-204ENST00000490751 MYL4P12829 197 aa33.81■■■■□ 3
LDB1-204ENST00000490751 ALDH1A3P47895 512 aa33.81■■■■□ 3
LDB1-204ENST00000490751 EPHA5P54756 1037 aa33.81■■■■□ 3
LDB1-204ENST00000490751 SLC39A12Q504Y0 691 aa33.81■■■■□ 3
LDB1-204ENST00000490751 NELFCDQ8IXH7 590 aa33.81■■■■□ 3
LDB1-204ENST00000490751 TTC9BQ8N6N2 239 aa33.81■■■■□ 3
LDB1-204ENST00000490751 DNAJC25Q9H1X3 360 aa33.81■■■■□ 3
LDB1-204ENST00000490751 AGPAT3Q9NRZ7 376 aa33.81■■■■□ 3
LDB1-204ENST00000490751 STK25O00506 426 aa33.8■■■■□ 3
LDB1-204ENST00000490751 ACTN4O43707 911 aaKnown RBP33.8■■■■□ 3
LDB1-204ENST00000490751 SLFN14P0C7P3 912 aa33.8■■■■□ 3
LDB1-204ENST00000490751 RFX1P22670 979 aa33.8■■■■□ 3
LDB1-204ENST00000490751 EPHB3P54753 998 aa33.8■■■■□ 3
LDB1-204ENST00000490751 LMBRD2Q68DH5 695 aaPredicted RBP33.8■■■■□ 3
LDB1-204ENST00000490751 SCARA3Q6AZY7 606 aa33.8■■■■□ 3
LDB1-204ENST00000490751 CSGALNACT2Q8N6G5 542 aa33.8■■■■□ 3
LDB1-204ENST00000490751 LRRC52Q8N7C0 313 aa33.8■■■■□ 3
LDB1-204ENST00000490751 CXorf38Q8TB03 319 aa33.8■■■■□ 3
LDB1-204ENST00000490751 SLC39A2Q9NP94 309 aa33.8■■■■□ 3
LDB1-204ENST00000490751 MOSPD3O75425 235 aa33.79■■■■□ 3
LDB1-204ENST00000490751 ECI2O75521 394 aa33.79■■■■□ 3
LDB1-204ENST00000490751 KRT19P08727 400 aa33.79■■■■□ 3
LDB1-204ENST00000490751 PFKFB1P16118 471 aa33.79■■■■□ 3
LDB1-204ENST00000490751 BFSP1Q12934 665 aa33.79■■■■□ 3
LDB1-204ENST00000490751 ANKRD36BP1Q96IX9 119 aa33.79■■■■□ 3
LDB1-204ENST00000490751 TBC1D17Q9HA65 648 aa33.79■■■■□ 3
LDB1-204ENST00000490751 KIAA1586Q9HCI6 787 aa33.79■■■■□ 3
LDB1-204ENST00000490751 INTS13Q9NVM9 706 aa33.79■■■■□ 3
LDB1-204ENST00000490751 PTPRJQ12913 1337 aa33.79■■■■□ 3
LDB1-204ENST00000490751 A0A1B0GVL5 298 aa33.78■■■■□ 3
LDB1-204ENST00000490751 SOAT2O75908 522 aa33.78■■■■□ 3
LDB1-204ENST00000490751 GJA1P17302 382 aa33.78■■■■□ 3
LDB1-204ENST00000490751 CMA1P23946 247 aa33.78■■■■□ 3
LDB1-204ENST00000490751 CDR1P51861 262 aa33.78■■■■□ 3
LDB1-204ENST00000490751 SURF1Q15526 300 aa33.78■■■■□ 3
LDB1-204ENST00000490751 HSFX1Q9UBD0 423 aa33.78■■■■□ 3
LDB1-204ENST00000490751 SIX4Q9UIU6 781 aa33.78■■■■□ 3
LDB1-204ENST00000490751 CLIC2O15247 247 aa33.77■■■■□ 3
LDB1-204ENST00000490751 RBP5P82980 135 aa33.77■■■■□ 3
LDB1-204ENST00000490751 TANGO2Q6ICL3 276 aa33.77■■■■□ 3
LDB1-204ENST00000490751 TMC8Q8IU68 726 aa33.77■■■■□ 3
LDB1-204ENST00000490751 OR5B17Q8NGF7 314 aa33.77■■■■□ 3
LDB1-204ENST00000490751 PAGE5Q96GU1 130 aa33.77■■■■□ 3
LDB1-204ENST00000490751 SEPT5Q99719 369 aaPredicted RBP33.77■■■■□ 3
LDB1-204ENST00000490751 LRRC3Q9BY71 257 aa33.77■■■■□ 3
LDB1-204ENST00000490751 PLA2G2FQ9BZM2 168 aa33.77■■■■□ 3
LDB1-204ENST00000490751 L1RE1Q9UN81 338 aa33.77■■■■□ 3
LDB1-204ENST00000490751 H0Y858 1186 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 FCARP24071 287 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 CYP2J2P51589 502 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 BMT2Q1RMZ1 405 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 FAM78AQ5JUQ0 283 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 HS2ST1Q7LGA3 356 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 ALYREFQ86V81 257 aaKnown RBP33.76■■■□□ 2.99
LDB1-204ENST00000490751 LRRTM3Q86VH5 581 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 PDCL2Q8N4E4 241 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 ELSPBP1Q96BH3 223 aa33.76■■■□□ 2.99
LDB1-204ENST00000490751 KLRC4O43908 158 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 HUS1O60921 280 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 TNNC2P02585 160 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 SNRPFP62306 86 aaKnown RBP33.75■■■□□ 2.99
LDB1-204ENST00000490751 TEAD2Q15562 447 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 SNRNP35Q16560 246 aaKnown RBP33.75■■■□□ 2.99
LDB1-204ENST00000490751 MGAT5BQ3V5L5 792 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 RDH13Q8NBN7 331 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 SHKBP1Q8TBC3 707 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 ZSWIM3Q96MP5 696 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 ASB16Q96NS5 453 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 PHOX2BQ99453 314 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 IRF2BPLQ9H1B7 796 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 HPSEQ9Y251 543 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 ASB3Q9Y575 518 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 ATP6V1DQ9Y5K8 247 aa33.75■■■□□ 2.99
LDB1-204ENST00000490751 TUFMP49411 452 aaKnown RBP33.74■■■□□ 2.99
LDB1-204ENST00000490751 PFKPQ01813 784 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 SMARCB1Q12824 385 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 PHLDB3Q6NSJ2 640 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 DCP1BQ8IZD4 617 aaKnown RBP33.74■■■□□ 2.99
LDB1-204ENST00000490751 XXYLT1Q8NBI6 393 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 SPPL2BQ8TCT7 592 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 C2orf15Q8WU43 125 aaKnown RBP33.74■■■□□ 2.99
LDB1-204ENST00000490751 PSMG2Q969U7 264 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 ZFP14Q9HCL3 533 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 FAM86C1Q9NVL1 165 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 GDAP2Q9NXN4 497 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 USP25Q9UHP3 1055 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 R3HCC1Q9Y3T6 440 aaKnown RBP33.74■■■□□ 2.99
LDB1-204ENST00000490751 SNX9Q9Y5X1 595 aa33.74■■■□□ 2.99
LDB1-204ENST00000490751 A0A1W2PRU2 124 aa33.73■■■□□ 2.99
LDB1-204ENST00000490751 DUOXA2Q1HG44 320 aa33.73■■■□□ 2.99
LDB1-204ENST00000490751 DNAJB7Q7Z6W7 309 aaPredicted RBP33.73■■■□□ 2.99
LDB1-204ENST00000490751 WDR49Q8IV35 697 aa33.73■■■□□ 2.99
LDB1-204ENST00000490751 CCDC105Q8IYK2 499 aa33.73■■■□□ 2.99
LDB1-204ENST00000490751 EXOC1Q9NV70 894 aa33.73■■■□□ 2.99
LDB1-204ENST00000490751 ABI2Q9NYB9 513 aaPredicted RBP33.73■■■□□ 2.99
LDB1-204ENST00000490751 COL4A3Q01955 1670 aa33.73■■■□□ 2.99
LDB1-204ENST00000490751 MRE11P49959 708 aa33.72■■■□□ 2.99
LDB1-204ENST00000490751 TSPY1Q01534 308 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms