RNA–Protein interactions for RNA: ENST00000490710.1

PTK7-217, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-217ENST00000490710 COQ4Q9Y3A0 265 aa16.81■□□□□ 0.28
PTK7-217ENST00000490710 H3BQ06 376 aaPredicted RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 GABRDO14764 452 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 PMM2O15305 246 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 N4BP1O75113 896 aaKnown RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 TACC1O75410 805 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 ASS1P00966 412 aaKnown RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 SPATA31D3P0C874 917 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 P4HA1P13674 534 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 CPB1P15086 417 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 FMO5P49326 533 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 MRPS5P82675 430 aaKnown RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 MYL7Q01449 175 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 UVSSAQ2YD98 709 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 PUS10Q3MIT2 529 aaKnown RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 SPATA31D4Q6ZUB0 917 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 RTL10Q7L3V2 364 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 IRF2BP1Q8IU81 584 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 ADGRF2Q8IZF7 708 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 CNOT6LQ96LI5 555 aaKnown RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 ACBD6Q9BR61 282 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 NAT10Q9H0A0 1025 aaKnown RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 MAN1C1Q9NR34 630 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 RAB20Q9NX57 234 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 DDX43Q9NXZ2 648 aaKnown RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
PTK7-217ENST00000490710 FBXW11Q9UKB1 542 aa16.8■□□□□ 0.28
PTK7-217ENST00000490710 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTK7-217ENST00000490710 WDR27A2RRH5 827 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 P4HA2O15460 535 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 CLSTN1O94985 981 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 ATF2P15336 505 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 WARSP23381 471 aaKnown RBP16.79■□□□□ 0.28
PTK7-217ENST00000490710 ELF1P32519 619 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 TFF2Q03403 129 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 CETN1Q12798 172 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 KCNH2Q12809 1159 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 GPR17Q13304 367 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 CBWD6Q4V339 395 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 CBWD3Q5JTY5 395 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 CBWD5Q5RIA9 395 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 SYCE2Q6PIF2 218 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 C11orf57Q6ZUT1 292 aaPredicted RBP16.79■□□□□ 0.28
PTK7-217ENST00000490710 FAXDC2Q96IV6 333 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 RTP3Q9BQQ7 232 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 ZCWPW1Q9H0M4 648 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 SFXN1Q9H9B4 322 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
PTK7-217ENST00000490710 POLIQ9UNA4 740 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 REV3LO60673 3130 aa16.79■□□□□ 0.28
PTK7-217ENST00000490710 ZMYND10O75800 440 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 AFPP02771 609 aaKnown RBP16.78■□□□□ 0.28
PTK7-217ENST00000490710 PCSK1P29120 753 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 GNL1P36915 607 aaPredicted RBP16.78■□□□□ 0.28
PTK7-217ENST00000490710 TSPY1Q01534 308 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 ITIH3Q06033 890 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 SMARCB1Q12824 385 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 WDR44Q5JSH3 913 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 LIN9Q5TKA1 542 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 RNF19BQ6ZMZ0 732 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 CCDC149Q6ZUS6 474 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 OSTM1Q86WC4 334 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 DCP1BQ8IZD4 617 aaKnown RBP16.78■□□□□ 0.28
PTK7-217ENST00000490710 SMRP1Q8NCR6 262 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 CMASQ8NFW8 434 aaPredicted RBP16.78■□□□□ 0.28
PTK7-217ENST00000490710 OR10T2Q8NGX3 314 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.78■□□□□ 0.28
PTK7-217ENST00000490710 KBTBD7Q8WVZ9 684 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 SEMA4DQ92854 862 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 MRPL45Q9BRJ2 306 aaKnown RBP16.78■□□□□ 0.28
PTK7-217ENST00000490710 PI4K2AQ9BTU6 479 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 DNAJC25Q9H1X3 360 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 S1PR5Q9H228 398 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 SNX25Q9H3E2 840 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 ZDHHC7Q9NXF8 308 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 FAM50BQ9Y247 325 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 NFE2L3Q9Y4A8 694 aa16.78■□□□□ 0.28
PTK7-217ENST00000490710 SYCE3A1L190 88 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 OR4Q2P0C623 313 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.28
PTK7-217ENST00000490710 NOP14P78316 857 aaKnown RBP16.77■□□□□ 0.28
PTK7-217ENST00000490710 ADCY1Q08828 1119 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 SMAD4Q13485 552 aaKnown RBP16.77■□□□□ 0.28
PTK7-217ENST00000490710 CLUL1Q15846 466 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 SPOPLQ6IQ16 392 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 CES5AQ6NT32 575 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 CYP26C1Q6V0L0 522 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTK7-217ENST00000490710 TCEAL8Q8IYN2 117 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 C12orf76Q8N812 135 aaPredicted RBP16.77■□□□□ 0.28
PTK7-217ENST00000490710 OR6B3Q8NGW1 331 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 ASB2Q96Q27 587 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 TMEM209Q96SK2 561 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 ADAM7Q9H2U9 754 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 SAMSN1Q9NSI8 373 aaKnown RBP16.77■□□□□ 0.28
PTK7-217ENST00000490710 CDH9Q9ULB4 789 aa16.77■□□□□ 0.28
PTK7-217ENST00000490710 CCDC195A0A1B0GUA6 201 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms