RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 LIMS2Q7Z4I7 341 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 TOP6BLQ8N6T0 577 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 ZCWPW1Q9H0M4 648 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 CYP4F11Q9HBI6 524 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 R3HCC1Q9Y3T6 440 aaKnown RBP16.54■□□□□ 0.24
VPS26A-207ENST00000490696 HUS1O60921 280 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
VPS26A-207ENST00000490696 XYLBO75191 536 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 C4BPAP04003 597 aaKnown RBP16.53■□□□□ 0.24
VPS26A-207ENST00000490696 AP3M2P53677 418 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 PMS1P54277 932 aaKnown RBP16.53■□□□□ 0.24
VPS26A-207ENST00000490696 MORC3Q14149 939 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 SOWAHAQ2M3V2 549 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
VPS26A-207ENST00000490696 ISM2Q6H9L7 571 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 GRASPQ7Z6J2 395 aaPredicted RBP16.53■□□□□ 0.24
VPS26A-207ENST00000490696 THEM5Q8N1Q8 247 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 TMEM86AQ8N2M4 240 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 SPATA18Q8TC71 538 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 PGLYRP2Q96PD5 576 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 CRISPLD1Q9H336 500 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 INSL5Q9Y5Q6 135 aa16.53■□□□□ 0.24
VPS26A-207ENST00000490696 DOCK8Q8NF50 2099 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 MTMR11A4FU01 709 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 PI4K2BG5E9Z4 385 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 GABRDO14764 452 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 IKBKBO14920 756 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 STAU1O95793 577 aaKnown RBP16.52■□□□□ 0.24
VPS26A-207ENST00000490696 CD44P16070 742 aaKnown RBP16.52■□□□□ 0.24
VPS26A-207ENST00000490696 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.24
VPS26A-207ENST00000490696 VAMP7P51809 220 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 MCCD1P59942 119 aaPredicted RBP16.52■□□□□ 0.24
VPS26A-207ENST00000490696 NTHL1P78549 312 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 ENPEPQ07075 957 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 INTS8Q75QN2 995 aaKnown RBP16.52■□□□□ 0.24
VPS26A-207ENST00000490696 DPH6Q7L8W6 267 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 OTOP3Q7RTS5 596 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 LRRTM3Q86VH5 581 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 OSTM1Q86WC4 334 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 ZC3H3Q8IXZ2 948 aaKnown RBP16.52■□□□□ 0.24
VPS26A-207ENST00000490696 FAM186BQ8IYM0 893 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 ZDHHC14Q8IZN3 488 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 TDRD5Q8NAT2 981 aaKnown RBP16.52■□□□□ 0.24
VPS26A-207ENST00000490696 ATAD1Q8NBU5 361 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 MKNK1Q9BUB5 465 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 XYLT2Q9H1B5 865 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 EPHX3Q9H6B9 360 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 HCFC1R1Q9NWW0 138 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 DNMT3BQ9UBC3 853 aaKnown RBP16.52■□□□□ 0.24
VPS26A-207ENST00000490696 MUTYHQ9UIF7 546 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 POLIQ9UNA4 740 aa16.52■□□□□ 0.24
VPS26A-207ENST00000490696 NOTCH4Q99466 2003 aa16.52■□□□□ 0.23
VPS26A-207ENST00000490696 DCXO43602 365 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 VNN1O95497 513 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 LRG1P02750 347 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 MYL6P60660 151 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 DUSP4Q13115 394 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 BIRC3Q13489 604 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 TRPC3Q13507 836 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 ZACNQ401N2 412 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 SLC39A12Q504Y0 691 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 ANKRD40Q6AI12 368 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 ADGRF2Q8IZF7 708 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 PLCD3Q8N3E9 789 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 KBTBD7Q8WVZ9 684 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 ACSF2Q96CM8 615 aaPredicted RBP16.51■□□□□ 0.23
VPS26A-207ENST00000490696 EEF2KMTQ96G04 330 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 DHTKD1Q96HY7 919 aaPredicted RBP16.51■□□□□ 0.23
VPS26A-207ENST00000490696 MYADMQ96S97 322 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 VRTNQ9H8Y1 702 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 DDX43Q9NXZ2 648 aaKnown RBP16.51■□□□□ 0.23
VPS26A-207ENST00000490696 YIPF1Q9Y548 306 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 PIEZO1Q92508 2521 aa16.51■□□□□ 0.23
VPS26A-207ENST00000490696 MYO10Q9HD67 2058 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 PPP1R3GB7ZBB8 358 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 BIN1O00499 593 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 PSMA7O14818 248 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 CETN3O15182 167 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 PHACTR2O75167 634 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 ALADP13716 330 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 FSHRP23945 695 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 CCNE1P24864 410 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 ATICP31939 592 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 PPP1R2P41236 205 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 LHX1P48742 406 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 LRRC63Q05C16 580 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 TWF1Q12792 350 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 STIM1Q13586 685 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 NCOA4Q13772 614 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 CAMK4Q16566 473 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 SV2AQ7L0J3 742 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 TTC9BQ8N6N2 239 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 SYAP1Q96A49 352 aaPredicted RBP16.5■□□□□ 0.23
VPS26A-207ENST00000490696 TSG101Q99816 390 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 ACBD6Q9BR61 282 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 C1QTNF1Q9BXJ1 281 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 AVENQ9NQS1 362 aaPredicted RBP16.5■□□□□ 0.23
VPS26A-207ENST00000490696 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
VPS26A-207ENST00000490696 CEP72Q9P209 647 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms