RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 MCM2P49736 904 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 ADCY7P51828 1080 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 NAPAP54920 295 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 CXADRP78310 365 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 SEMG2Q02383 582 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 TLE3Q04726 772 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 PSMD2Q13200 908 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 PTPAQ15257 358 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 MAP7D1Q3KQU3 841 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 TMEM92Q6UXU6 159 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 TTC30AQ86WT1 665 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 MICU3Q86XE3 530 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 RAB11FIP4Q86YS3 637 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 HACE1Q8IYU2 909 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 GALNT15Q8N3T1 639 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 FANCBQ8NB91 859 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 CCDC148Q8NFR7 591 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 RIN3Q8TB24 985 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 BAHD1Q8TBE0 780 aaPredicted RBP8.03□□□□□ -1.12
COL9A1-209ENST00000489861 BICD2Q8TD16 824 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 USP33Q8TEY7 942 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 PSPC1Q8WXF1 523 aaKnown RBP8.03□□□□□ -1.12
COL9A1-209ENST00000489861 WBP1Q96G27 269 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 C22orf23Q9BZE7 217 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 IL25Q9H293 177 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 BMP2KQ9NSY1 1161 aaPredicted RBP8.03□□□□□ -1.12
COL9A1-209ENST00000489861 FBXL5Q9UKA1 691 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 LRBAP50851 2863 aa8.03□□□□□ -1.12
COL9A1-209ENST00000489861 BSNQ9UPA5 3926 aa8.02□□□□□ -1.12
COL9A1-209ENST00000489861 SMCO2A6NFE2 343 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 GOLGA8CPA6NN73 597 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 INO80B-WBP1J3KQ70 363 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 SLC27A2O14975 620 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 MSH4O15457 936 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 ZBTB43O43298 467 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 CDC45O75419 566 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 HLA-EP13747 358 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 GJA4P35212 333 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 DPP6P42658 865 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 IL12RB1P42701 662 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 CLCNKBP51801 687 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 JAK3P52333 1124 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 PTENP60484 403 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 MBTD1Q05BQ5 628 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 MRPL58Q14197 206 aaKnown RBP8.02□□□□□ -1.13
COL9A1-209ENST00000489861 SMAD1Q15797 465 aaKnown RBP8.02□□□□□ -1.13
COL9A1-209ENST00000489861 CRY1Q16526 586 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 RTN1Q16799 776 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 C2orf27AQ580R0 203 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 SPDYCQ5MJ68 293 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 GPR158Q5T848 1215 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 CREB3L3Q68CJ9 461 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 TPGS2Q68CL5 300 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 SLC27A1Q6PCB7 646 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 RNF19BQ6ZMZ0 732 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 TMTC3Q6ZXV5 915 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 FERMT3Q86UX7 667 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 CCDC33Q8N5R6 958 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 SETD7Q8WTS6 366 aaKnown RBP8.02□□□□□ -1.13
COL9A1-209ENST00000489861 CCDC136Q96JN2 1154 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 CRISPLD1Q9H336 500 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 DHX33Q9H6R0 707 aaKnown RBP8.02□□□□□ -1.13
COL9A1-209ENST00000489861 PRDM16Q9HAZ2 1276 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 GOLGA2P5Q9HBQ8 144 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 AFF4Q9UHB7 1163 aaKnown RBP8.02□□□□□ -1.13
COL9A1-209ENST00000489861 TPCN1Q9ULQ1 816 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 CCL26Q9Y258 94 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 YIPF1Q9Y548 306 aa8.02□□□□□ -1.13
COL9A1-209ENST00000489861 A0A1B0GUA9 196 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 TBX3O15119 743 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 RRP8O43159 456 aaKnown RBP8.01□□□□□ -1.13
COL9A1-209ENST00000489861 EPB41L2O43491 1005 aaKnown RBP8.01□□□□□ -1.13
COL9A1-209ENST00000489861 REC8O95072 547 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 SYPP08247 313 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 WEE1P30291 646 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 ADSSP30520 456 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 SFNP31947 248 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 SEC13P55735 322 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 CYP4F8P98187 520 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 MYO1EQ12965 1108 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 NECTIN1Q15223 517 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 UPP1Q16831 310 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 APOA5Q6Q788 366 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 B3GNT9Q6UX72 402 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 DHX32Q7L7V1 743 aaKnown RBP8.01□□□□□ -1.13
COL9A1-209ENST00000489861 PRICKLE2Q7Z3G6 844 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 MIER3Q7Z3K6 550 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 SLC41A1Q8IVJ1 513 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 FAM177A1Q8N128 213 aaPredicted RBP8.01□□□□□ -1.13
COL9A1-209ENST00000489861 SPRYD3Q8NCJ5 442 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 SLC5A5Q92911 643 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 KIF2CQ99661 725 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 JPH2Q9BR39 696 aaPredicted RBP8.01□□□□□ -1.13
COL9A1-209ENST00000489861 LSG1Q9H089 658 aaKnown RBP8.01□□□□□ -1.13
COL9A1-209ENST00000489861 ATXN3LQ9H3M9 355 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 IL21RQ9HBE5 538 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 C6orf50Q9HD87 102 aa8.01□□□□□ -1.13
COL9A1-209ENST00000489861 THG1LQ9NWX6 298 aaKnown RBP8.01□□□□□ -1.13
COL9A1-209ENST00000489861 MMP17Q9ULZ9 603 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms