RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 EBF3Q9H4W6 596 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 ASAH2Q9NR71 780 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 THSD1Q9NS62 852 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 GKN1Q9NS71 199 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 PKD2L1Q9P0L9 805 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 MTRRQ9UBK8 725 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 ITGB1BP2Q9UKP3 347 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 NOP58Q9Y2X3 529 aaKnown RBP8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 PCDHB1Q9Y5F3 818 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 CDY1Q9Y6F8 540 aa8.4□□□□□ -1.06
EXOSC3-206ENST00000489414 BAZ2BQ9UIF8 2168 aaKnown RBP8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 ESPL1Q14674 2120 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 IGHV1OR15-9A0A0B4J2B8 117 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 ARL5CA6NH57 179 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 PRRG1O14668 218 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 TADA2AO75478 443 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 ATG7O95352 703 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 PRAMEF12O95522 483 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 SFPQP23246 707 aaKnown RBP eCLIP8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 GJA4P35212 333 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 MLH1P40692 756 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 SCNN1GP51170 649 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 USP11P51784 963 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 GABREP78334 506 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 ZXDCQ2QGD7 858 aaPredicted RBP8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 TRIM68Q6AZZ1 485 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 IQCEQ6IPM2 695 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 IFNL3Q8IZI9 196 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 PANK1Q8TE04 598 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 SSH3Q8TE77 659 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 NLRP7Q8WX94 980 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 RABGGTAQ92696 567 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 CD101Q93033 1021 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 CCDC97Q96F63 343 aaPredicted RBP8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 SCLT1Q96NL6 688 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 CCNL2Q96S94 520 aaPredicted RBP8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 THG1LQ9NWX6 298 aaKnown RBP8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 MIOSQ9NXC5 875 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 CEP72Q9P209 647 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 VPS9D1Q9Y2B5 631 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 INSL5Q9Y5Q6 135 aa8.39□□□□□ -1.07
EXOSC3-206ENST00000489414 ACANP16112 2415 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 A0A1W2PRU2 124 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 PALM3A6NDB9 673 aaPredicted RBP8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 K7EQS6 105 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 CBX4O00257 560 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 HNRNPRO43390 633 aaKnown RBP8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 GNAI2P04899 355 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 PRKCGP05129 697 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 ANP32AP39687 249 aaKnown RBP8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 LSSP48449 732 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 CDR1P51861 262 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 FOSBP53539 338 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 SEC13P55735 322 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 CLN3Q13286 438 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 CLCA4Q14CN2 919 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 TBR1Q16650 682 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 ZSCAN23Q3MJ62 389 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 SGO2Q562F6 1265 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 WDR45BQ5MNZ6 344 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 EFCAB12Q6NXP0 572 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 USP53Q70EK8 1073 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 TCEAL8Q8IYN2 117 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 ELMOD1Q8N336 334 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 LRRC71Q8N4P6 559 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 ZCCHC9Q8N567 271 aaKnown RBP8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 ZNF461Q8TAF7 563 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 HASPINQ8TF76 798 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 DNASE2BQ8WZ79 361 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 ZNF512Q96ME7 567 aaPredicted RBP8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 ADNPQ9H2P0 1102 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 UBN1Q9NPG3 1134 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 DDX19BQ9UMR2 479 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 NFE2L3Q9Y4A8 694 aa8.38□□□□□ -1.07
EXOSC3-206ENST00000489414 TCRBV21S2A2A0A5A6 115 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 MAGEB2O15479 319 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 GPAA1O43292 621 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 MTSS1O43312 755 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 ABLIM3O94929 683 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 APPP05067 770 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 ARSAP15289 507 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 GNAT2P19087 354 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 ATP4AP20648 1035 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 TMOD1P28289 359 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 WEE1P30291 646 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 INSM1Q01101 510 aaPredicted RBP8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 MTMR1Q13613 665 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 DSG2Q14126 1118 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 INAVAQ3KP66 663 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 ZSCAN25Q6NSZ9 544 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 KANSL1Q7Z3B3 1105 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 PGBD3Q8N328 593 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 FOXJ1Q92949 421 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 ZFP42Q96MM3 310 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 LRRC3Q9BY71 257 aa8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 GCOM2Q9BZD3 368 aaPredicted RBP8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 RWDD1Q9H446 243 aaPredicted RBP8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 MYH9P35579 1960 aaKnown RBP8.37□□□□□ -1.07
EXOSC3-206ENST00000489414 CUBNO60494 3623 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms