RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 FGF19O95750 216 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 EGFP01133 1207 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 MUTP22033 750 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 CCT6AP40227 531 aaKnown RBP17.62■□□□□ 0.41
USP48-210ENST00000489108 MCM2P49736 904 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 RUNX3Q13761 415 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 ZNF174Q15697 407 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 DAB2IPQ5VWQ8 1189 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 DAW1Q8N136 415 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 FAM83CQ9BQN1 747 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 SLC46A2Q9BY10 475 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 ADAM33Q9BZ11 813 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 HPS4Q9NQG7 708 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 KMT5AQ9NQR1 393 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 ABCA7Q8IZY2 2146 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 NUP205Q92621 2012 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 BCLAF3A2AJT9 711 aaKnown RBP17.61■□□□□ 0.41
USP48-210ENST00000489108 SRRM3A6NNA2 597 aaPredicted RBP17.61■□□□□ 0.41
USP48-210ENST00000489108 RHOBTB1O94844 696 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 OR52Z1P0C646 297 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 AARSP49588 968 aaKnown RBP eCLIP17.61■□□□□ 0.41
USP48-210ENST00000489108 CDR1P51861 262 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 ELF2Q15723 593 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 TRIM68Q6AZZ1 485 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 DSTYKQ6XUX3 929 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 ITIH5Q86UX2 942 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 GATA6Q92908 595 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 LPIN3Q9BQK8 851 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 SCNM1Q9BWG6 230 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 EBF3Q9H4W6 596 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 IL21Q9HBE4 155 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 KIAA1024Q9UPX6 916 aa17.61■□□□□ 0.41
USP48-210ENST00000489108 LNP1A1A4G5 178 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 SLC16A4O15374 487 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 HIP1RO75146 1068 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 LRPAP1P30533 357 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 GALK1P51570 392 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 DMP1Q13316 513 aaPredicted RBP17.6■□□□□ 0.41
USP48-210ENST00000489108 MYBPC2Q14324 1141 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 OVOS1Q6IE37 1185 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 ANKFY1Q9P2R3 1169 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 INVSQ9Y283 1065 aa17.6■□□□□ 0.41
USP48-210ENST00000489108 RBM19Q9Y4C8 960 aaKnown RBP17.6■□□□□ 0.41
USP48-210ENST00000489108 ZNF638Q14966 1978 aaKnown RBP17.6■□□□□ 0.41
USP48-210ENST00000489108 AKAP13Q12802 2813 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 TMEM8BA6NDV4 472 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 SFI1A8K8P3 1242 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 LARGE1O95461 756 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 CXCL8P10145 99 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 CEACAM1P13688 526 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 U2AF2P26368 475 aaKnown RBP eCLIP17.59■□□□□ 0.415e-6■■■□□ 16
USP48-210ENST00000489108 GUCY2FP51841 1108 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 TRIM29Q14134 588 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 ZBTB6Q15916 424 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 HAUS3Q68CZ6 603 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 LRSAM1Q6UWE0 723 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 CMTM8Q8IZV2 173 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 KIF12Q96FN5 646 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
USP48-210ENST00000489108 CCL26Q9Y258 94 aa17.59■□□□□ 0.41
USP48-210ENST00000489108 CDX4O14627 284 aaPredicted RBP17.58■□□□□ 0.4
USP48-210ENST00000489108 TOM1L1O75674 476 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 ARSAP15289 507 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 TYMPP19971 482 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 CDC25CP30307 473 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 RING1Q06587 406 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 MAPK7Q13164 816 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 NOLC1Q14978 699 aaKnown RBP eCLIP17.58■□□□□ 0.4
USP48-210ENST00000489108 NAIF1Q69YI7 327 aaPredicted RBP17.58■□□□□ 0.4
USP48-210ENST00000489108 ARMCX5Q6P1M9 558 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 NSUN7Q8NE18 718 aaKnown RBP17.58■□□□□ 0.4
USP48-210ENST00000489108 RPLP0P6Q8NHW5 317 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 GIPC2Q8TF65 315 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 SEPT5Q99719 369 aaPredicted RBP17.58■□□□□ 0.4
USP48-210ENST00000489108 PLEKHA5Q9HAU0 1116 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 TMEM9BQ9NQ34 198 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 EBF1Q9UH73 591 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 THADAQ6YHU6 1953 aa17.58■□□□□ 0.4
USP48-210ENST00000489108 DENND4CQ5VZ89 1909 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 ANK1P16157 1881 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 TTC26A0AVF1 554 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 PATE3B3GLJ2 98 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 E9PMD0 336 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 PPEF2O14830 753 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 KHNYNO15037 678 aaKnown RBP17.57■□□□□ 0.4
USP48-210ENST00000489108 JAK2O60674 1132 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 APBB3O95704 486 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 ATF6P18850 670 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 CSRP1P21291 193 aaKnown RBP17.57■□□□□ 0.4
USP48-210ENST00000489108 DRD1P21728 446 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 GBP1P32455 592 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 TUFMP49411 452 aaKnown RBP17.57■□□□□ 0.4
USP48-210ENST00000489108 GUCY1B3Q02153 619 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 KARSQ15046 597 aaKnown RBP17.57■□□□□ 0.4
USP48-210ENST00000489108 ME3Q16798 604 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 MGAT5BQ3V5L5 792 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 SYT13Q7L8C5 426 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 MAB21L3Q8N8X9 362 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 USP13Q92995 863 aaPredicted RBP17.57■□□□□ 0.4
USP48-210ENST00000489108 GCNAQ96QF7 691 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms