RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PFKPQ01813 784 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 MLF2Q15773 248 aaPredicted RBP24.81■■□□□ 1.56
COL9A3-213ENST00000489045 FAM26FQ5R3K3 315 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 RESP18Q5W5W9 173 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 TMC8Q8IU68 726 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 THEM5Q8N1Q8 247 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 SHKBP1Q8TBC3 707 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 CACTINQ8WUQ7 758 aaKnown RBP24.81■■□□□ 1.56
COL9A3-213ENST00000489045 SHDQ96IW2 340 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 ZSWIM3Q96MP5 696 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 ASB16Q96NS5 453 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 LRRC3Q9BY71 257 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 FOXQ1Q9C009 403 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 ZFP14Q9HCL3 533 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 FAM13BQ9NYF5 915 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 CFAP45Q9UL16 551 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 AGAP1Q9UPQ3 857 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 SIT1Q9Y3P8 196 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 COL4A2P08572 1712 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 TICRRQ7Z2Z1 1910 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 ZFHX2Q9C0A1 2572 aaPredicted RBP24.8■■□□□ 1.56
COL9A3-213ENST00000489045 KIAA0391O15091 583 aaKnown RBP24.8■■□□□ 1.56
COL9A3-213ENST00000489045 EIF3DO15371 548 aaKnown RBP eCLIP24.8■■□□□ 1.56
COL9A3-213ENST00000489045 DCNP07585 359 aaKnown RBP24.8■■□□□ 1.56
COL9A3-213ENST00000489045 CASP1P29466 404 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 HOXD13P35453 343 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 ANGPT1Q15389 498 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 TEAD2Q15562 447 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 SLC44A4Q53GD3 710 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 EPM2AIP1Q7L775 607 aaPredicted RBP24.8■■□□□ 1.56
COL9A3-213ENST00000489045 PJA1Q8NG27 643 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 MTMR12Q9C0I1 747 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 HSFX1Q9UBD0 423 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 ITGA11Q9UKX5 1188 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 NUP210Q8TEM1 1887 aaPredicted RBP24.8■■□□□ 1.56
COL9A3-213ENST00000489045 USP34Q70CQ2 3546 aa24.8■■□□□ 1.56
COL9A3-213ENST00000489045 PRKCQQ04759 706 aa24.79■■□□□ 1.56
COL9A3-213ENST00000489045 SCARA3Q6AZY7 606 aa24.79■■□□□ 1.56
COL9A3-213ENST00000489045 UNC13DQ70J99 1090 aa24.79■■□□□ 1.56
COL9A3-213ENST00000489045 CXorf38Q8TB03 319 aa24.79■■□□□ 1.56
COL9A3-213ENST00000489045 SMARCD2Q92925 531 aa24.79■■□□□ 1.56
COL9A3-213ENST00000489045 SEPT5Q99719 369 aaPredicted RBP24.79■■□□□ 1.56
COL9A3-213ENST00000489045 BLZF1Q9H2G9 400 aa24.79■■□□□ 1.56
COL9A3-213ENST00000489045 ASB3Q9Y575 518 aa24.79■■□□□ 1.56
COL9A3-213ENST00000489045 MYO15AQ9UKN7 3530 aa24.79■■□□□ 1.56
COL9A3-213ENST00000489045 PATJQ8NI35 1801 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 A0A1W2PRU2 124 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 TMEM191BP0C7N4 346 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 BFSP1Q12934 665 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 GRM2Q14416 872 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 LMBRD2Q68DH5 695 aaPredicted RBP24.78■■□□□ 1.56
COL9A3-213ENST00000489045 LRRTM3Q86VH5 581 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 CBWD2Q8IUF1 395 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 CSGALNACT2Q8N6G5 542 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 LRRC52Q8N7C0 313 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 ZSCAN18Q8TBC5 510 aaPredicted RBP24.78■■□□□ 1.56
COL9A3-213ENST00000489045 ZNF507Q8TCN5 953 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 PSMG2Q969U7 264 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 DDX23Q9BUQ8 820 aaKnown RBP24.78■■□□□ 1.56
COL9A3-213ENST00000489045 SLITRK6Q9H5Y7 841 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 HSPBP1Q9NZL4 362 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 DLGAP2Q9P1A6 1054 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 RCOR1Q9UKL0 485 aa24.78■■□□□ 1.56
COL9A3-213ENST00000489045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.77■■□□□ 1.56
COL9A3-213ENST00000489045 KANSL1LA0AUZ9 987 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 ZNF233A6NK53 670 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 LRRN2O75325 713 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 KRT19P08727 400 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 NBL1P41271 181 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 AFMP43652 599 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 EHHADHQ08426 723 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 MGAT5BQ3V5L5 792 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 DNAJB7Q7Z6W7 309 aaPredicted RBP24.77■■□□□ 1.56
COL9A3-213ENST00000489045 ITIH5Q86UX2 942 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 PDCL2Q8N4E4 241 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 LPIN3Q9BQK8 851 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 ZNF334Q9HCZ1 680 aaPredicted RBP24.77■■□□□ 1.56
COL9A3-213ENST00000489045 SIX4Q9UIU6 781 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 L1RE1Q9UN81 338 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 PTPRJQ12913 1337 aa24.77■■□□□ 1.56
COL9A3-213ENST00000489045 DENND4CQ5VZ89 1909 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 PROB1E7EW31 1015 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 TGFB1I1O43294 461 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 ATF6P18850 670 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 VIPR2P41587 438 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 TUFMP49411 452 aaKnown RBP24.76■■□□□ 1.55
COL9A3-213ENST00000489045 SMARCB1Q12824 385 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 VITQ6UXI7 678 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 TPRG1Q6ZUI0 275 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 NELFCDQ8IXH7 590 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 DCP1BQ8IZD4 617 aaKnown RBP24.76■■□□□ 1.55
COL9A3-213ENST00000489045 FAM200AQ8TCP9 573 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 SPPL2BQ8TCT7 592 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 C2orf15Q8WU43 125 aaKnown RBP24.76■■□□□ 1.55
COL9A3-213ENST00000489045 ANKRD36BP1Q96IX9 119 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 GPR88Q9GZN0 384 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 TRPV4Q9HBA0 871 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 AGPAT3Q9NRZ7 376 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 INTS13Q9NVM9 706 aa24.76■■□□□ 1.55
COL9A3-213ENST00000489045 UBE4BO95155 1302 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms