RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CCNE1P24864 410 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 ACOT2P49753 483 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 MLLT6P55198 1093 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-231ENST00000488905 PUM1Q14671 1186 aaKnown RBP eCLIP19.94■□□□□ 0.78
HDAC6-231ENST00000488905 PPP2R5DQ14738 602 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 SLC39A12Q504Y0 691 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 ZC2HC1CQ53FD0 456 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-231ENST00000488905 ADALQ6DHV7 355 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 MAMSTRQ6ZN01 415 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 ITIH5Q86UX2 942 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 CSGALNACT1Q8TDX6 532 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 ST6GALNAC4Q9H4F1 302 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 ASB7Q9H672 318 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 DSEQ9UL01 958 aa19.94■□□□□ 0.78
HDAC6-231ENST00000488905 FGF19O95750 216 aa19.93■□□□□ 0.78
HDAC6-231ENST00000488905 CCR3P51677 355 aa19.93■□□□□ 0.78
HDAC6-231ENST00000488905 SLFN12LQ6IEE8 588 aa19.93■□□□□ 0.78
HDAC6-231ENST00000488905 C1orf228Q6PIY5 440 aa19.93■□□□□ 0.78
HDAC6-231ENST00000488905 DNAJB7Q7Z6W7 309 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-231ENST00000488905 ARID3BQ8IVW6 561 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-231ENST00000488905 SECISBP2LQ93073 1101 aaKnown RBP19.93■□□□□ 0.78
HDAC6-231ENST00000488905 SEPT5Q99719 369 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-231ENST00000488905 CCSER1Q9C0I3 900 aa19.93■□□□□ 0.78
HDAC6-231ENST00000488905 LMAN1LQ9HAT1 526 aa19.93■□□□□ 0.78
HDAC6-231ENST00000488905 DLL3Q9NYJ7 618 aa19.93■□□□□ 0.78
HDAC6-231ENST00000488905 AGO2Q9UKV8 859 aaKnown RBP19.93■□□□□ 0.78
HDAC6-231ENST00000488905 STYXL1Q9Y6J8 313 aa19.93■□□□□ 0.78
HDAC6-231ENST00000488905 SLC38A8A6NNN8 435 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 CHRNB1P11230 501 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 GABRR2P28476 465 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 TAF6P49848 677 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 NRLP54845 237 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 VEPH1Q14D04 833 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 ARHGAP15Q53QZ3 475 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 SFR1Q86XK3 245 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 KRI1Q8N9T8 703 aaKnown RBP19.92■□□□□ 0.78
HDAC6-231ENST00000488905 HVCN1Q96D96 273 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 LPIN3Q9BQK8 851 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 ZCWPW1Q9H0M4 648 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 ATXN3LQ9H3M9 355 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 SPAG17Q6Q759 2223 aa19.92■□□□□ 0.78
HDAC6-231ENST00000488905 MED19A0JLT2 244 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-231ENST00000488905 DPYSL4O14531 572 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 ATF6P18850 670 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 DDIT3P35638 169 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 SOX9P48436 509 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 KPNA1P52294 538 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-231ENST00000488905 LRRC32Q14392 662 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 MGAT5BQ3V5L5 792 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 GPR158Q5T848 1215 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 METTL23Q86XA0 190 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 EFCAB13Q8IY85 973 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 GPR161Q8N6U8 529 aaKnown RBP19.91■□□□□ 0.78
HDAC6-231ENST00000488905 FAM200AQ8TCP9 573 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 EPSTI1Q96J88 318 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 PYM1Q9BRP8 204 aaKnown RBP19.91■□□□□ 0.78
HDAC6-231ENST00000488905 C8orf33Q9H7E9 229 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-231ENST00000488905 DPP3Q9NY33 737 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 OBP2AQ9NY56 170 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 STK17AQ9UEE5 414 aa19.91■□□□□ 0.78
HDAC6-231ENST00000488905 VPS37CA5D8V6 355 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-231ENST00000488905 CYB561D2O14569 222 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 PPP1R37O75864 691 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 PRAMEF12O95522 483 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 CDC25CP30307 473 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 TUFMP49411 452 aaKnown RBP19.9■□□□□ 0.78
HDAC6-231ENST00000488905 CYP4F8P98187 520 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 SATB1Q01826 763 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 POU5F1Q01860 360 aaKnown RBP19.9■□□□□ 0.78
HDAC6-231ENST00000488905 GAS6Q14393 721 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 RSPO4Q2I0M5 234 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-231ENST00000488905 ARHGAP29Q52LW3 1261 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 USP49Q70CQ1 688 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 DYMQ7RTS9 669 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 GPIHBP1Q8IV16 184 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 C2orf15Q8WU43 125 aaKnown RBP19.9■□□□□ 0.78
HDAC6-231ENST00000488905 POMGNT1Q8WZA1 660 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 LRRC3BQ96PB8 259 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 GCNAQ96QF7 691 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 IKZF4Q9H2S9 585 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 GMEB2Q9UKD1 530 aa19.9■□□□□ 0.78
HDAC6-231ENST00000488905 MYBPHLA2RUH7 354 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 SPECC1L-ADORA2AF8WAN1 911 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 ADSSP30520 456 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 CTHP32929 405 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 CDR1P51861 262 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 SMARCB1Q12824 385 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 PTPAQ15257 358 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 TXNDC11Q6PKC3 985 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 CRELD2Q6UXH1 353 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-231ENST00000488905 ZNF720Q7Z2F6 126 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 THEM5Q8N1Q8 247 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 SPPL2BQ8TCT7 592 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 ATG2BQ96BY7 2078 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 ZFYVE19Q96K21 471 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 ZNF560Q96MR9 790 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 TASP1Q9H6P5 420 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 IL21Q9HBE4 155 aa19.89■□□□□ 0.77
HDAC6-231ENST00000488905 RBM12Q9NTZ6 932 aaKnown RBP19.89■□□□□ 0.77
HDAC6-231ENST00000488905 SEL1LQ9UBV2 794 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms