RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SFNP31947 248 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 BMPR1AP36894 532 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 SARSP49591 514 aaKnown RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 CRYBB1P53674 252 aaPredicted RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 YARSP54577 528 aaKnown RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 RBM10P98175 930 aaKnown RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 DLX2Q07687 328 aaPredicted RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 CAMK1Q14012 370 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 ANKRD1Q15327 319 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 TARBP2Q15633 366 aaKnown RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 NKPD1Q17RQ9 610 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 SPOUT1Q5T280 376 aaKnown RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 GALNT17Q6IS24 598 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 MOXD1Q6UVY6 613 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 ANO5Q75V66 913 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 RHPN2Q8IUC4 686 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 SPACA3Q8IXA5 215 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 LPPQ93052 612 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 TMEM143Q96AN5 459 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 MRPL38Q96DV4 380 aaKnown RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 FAM167AQ96KS9 214 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 NLRP4Q96MN2 994 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 MAP7D2Q96T17 732 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 FDXACB1Q9BRP7 624 aaPredicted RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 FTHL17Q9BXU8 183 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 TMEM60Q9H2L4 133 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 UBE2ZQ9H832 354 aaPredicted RBP6.6□□□□□ -1.35
CDHR3-213ENST00000488386 KCNMB3Q9NPA1 279 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 CD320Q9NPF0 282 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 RGS18Q9NS28 235 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 PCMTD2Q9NV79 361 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 CEP131Q9UPN4 1083 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 MAPK8IP1Q9UQF2 711 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 EFR3BQ9Y2G0 817 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 PCDHB7Q9Y5E2 793 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 TRANK1O15050 2925 aa6.6□□□□□ -1.35
CDHR3-213ENST00000488386 MUC3AQ02505 3323 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 PER2O15055 1255 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 MAGEB2O15479 319 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 UBOX5O94941 541 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 STAG3L1P0CL83 205 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 DARSP14868 501 aaKnown RBP6.59□□□□□ -1.35
CDHR3-213ENST00000488386 XBP1P17861 261 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 TMOD1P28289 359 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 TXKP42681 527 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 PSMC5P62195 406 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 SPIRE1Q08AE8 756 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 PPP2R5CQ13362 524 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 XKR3Q5GH77 459 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 PPP4R3AQ6IN85 833 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 LRRC55Q6ZSA7 311 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 SLC24A5Q71RS6 500 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 MAEAQ7L5Y9 396 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 RBM23Q86U06 439 aaKnown RBP6.59□□□□□ -1.35
CDHR3-213ENST00000488386 TPH2Q8IWU9 490 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 CMTR2Q8IYT2 770 aaKnown RBP6.59□□□□□ -1.35
CDHR3-213ENST00000488386 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.59□□□□□ -1.35
CDHR3-213ENST00000488386 POF1BQ8WVV4 589 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 WASF1Q92558 559 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 CEP170P1Q96L14 293 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 LXNQ9BS40 222 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 NSUN3Q9H649 340 aaKnown RBP6.59□□□□□ -1.35
CDHR3-213ENST00000488386 ZFP64Q9NPA5 681 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 CYP26B1Q9NR63 512 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 TYW1Q9NV66 732 aaKnown RBP6.59□□□□□ -1.35
CDHR3-213ENST00000488386 SUCLA2Q9P2R7 463 aaPredicted RBP6.59□□□□□ -1.35
CDHR3-213ENST00000488386 INPP5FQ9Y2H2 1132 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 SQORQ9Y6N5 450 aa6.59□□□□□ -1.35
CDHR3-213ENST00000488386 BRWD1Q9NSI6 2320 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 IGKV6-21A0A0C4DH24 114 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 NT5C1B-RDH14C9J2C7 533 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 C5orf67F2Z3F1 127 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 TBX10O75333 385 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 MAFO75444 373 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 SRGAP2CP0DJJ0 459 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 ATF7P17544 494 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 YWHABP31946 246 aaKnown RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 MCM7P33993 719 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 LTBRP36941 435 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 CD96P40200 585 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 QARSP47897 775 aaKnown RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 SOX9P48436 509 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 POLGP54098 1239 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 HYAL1Q12794 435 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 TRIM29Q14134 588 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 EPHA7Q15375 998 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 ZNF174Q15697 407 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 CALCRLQ16602 461 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 PTPROQ16827 1216 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 TIGD5Q53EQ6 642 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 XKR9Q5GH70 373 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 CLLU1OSQ5K130 101 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 SFRP5Q5T4F7 317 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 ZNF574Q6ZN55 896 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 ECHDC2Q86YB7 292 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 PHACTR4Q8IZ21 702 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 RDM1Q8NG50 284 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms