RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 TFIP11Q9UBB9 837 aaKnown RBP12.14□□□□□ -0.47
PCYT1A-215ENST00000488235 CCDC39Q9UFE4 941 aa12.14□□□□□ -0.47
PCYT1A-215ENST00000488235 MORC2Q9Y6X9 1032 aaPredicted RBP12.14□□□□□ -0.47
PCYT1A-215ENST00000488235 HEPACAM2A8MVW5 462 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 HCRTO43612 131 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 PRPF6O94906 941 aaKnown RBP12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 IDEP14735 1019 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 GAP43P17677 238 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 HOXD13P35453 343 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 STAT6P42226 847 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 NASPP49321 788 aaPredicted RBP12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 E2F4Q16254 413 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 WDR44Q5JSH3 913 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 FOXD4L5Q5VV16 416 aaPredicted RBP12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 TSSK4Q6SA08 328 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 CCDC73Q6ZRK6 1079 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 C1orf127Q8N9H9 656 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 FOXD4L4Q8WXT5 416 aaPredicted RBP12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 PSMG2Q969U7 264 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 CLDN23Q96B33 292 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 HVCN1Q96D96 273 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 TRMT61BQ9BVS5 477 aaKnown RBP12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 OXCT2Q9BYC2 517 aaPredicted RBP12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 PCIF1Q9H4Z3 704 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 TRPV4Q9HBA0 871 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 IL21Q9HBE4 155 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 OLFML3Q9NRN5 406 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 SPATA6Q9NWH7 488 aaPredicted RBP12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 SEL1LQ9UBV2 794 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 MIA3Q5JRA6 1907 aa12.13□□□□□ -0.47
PCYT1A-215ENST00000488235 PTPRJQ12913 1337 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 PATJQ8NI35 1801 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 TULP1O00294 542 aaPredicted RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 PRAMEF12O95522 483 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 PSMC3P17980 439 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 GABRR2P28476 465 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 ABCD1P33897 745 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 ALDH1A3P47895 512 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 SOX9P48436 509 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 GPR15P49685 360 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 TAF6P49848 677 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 EPHB3P54753 998 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 CYP4F8P98187 520 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 FOXD4L6Q3SYB3 417 aaPredicted RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 LMBRD2Q68DH5 695 aaPredicted RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 FOXD4L3Q6VB84 417 aaPredicted RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 ARID3BQ8IVW6 561 aaPredicted RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 BRSK2Q8IWQ3 736 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 LEMD2Q8NC56 503 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 GIPC2Q8TF65 315 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 DNASE1L2Q92874 299 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 ZFYVE19Q96K21 471 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 SEPT5Q99719 369 aaPredicted RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 OSBPL6Q9BZF3 934 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 SLITRK6Q9H5Y7 841 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 PANK4Q9NVE7 773 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 SIX4Q9UIU6 781 aa12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.12□□□□□ -0.47
PCYT1A-215ENST00000488235 TICRRQ7Z2Z1 1910 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 LMNAP02545 664 aaKnown RBP12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 ITGB3P05106 788 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 CASP1P29466 404 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 HOXC13P31276 330 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 TXLNAP40222 546 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 MTAPQ13126 283 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 PLD1Q13393 1074 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 PKP1Q13835 747 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 GAS6Q14393 721 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 MGAT5BQ3V5L5 792 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 SDHAF4Q5VUM1 108 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 SHC4Q6S5L8 630 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 ZNF852Q6ZMS4 543 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 TMEM150AQ86TG1 271 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 OSTM1Q86WC4 334 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 MFSD6LQ8IWD5 586 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 PDCL2Q8N4E4 241 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 SMG9Q9H0W8 520 aaKnown RBP12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 ATXN3LQ9H3M9 355 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 PDE11AQ9HCR9 933 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 ABI2Q9NYB9 513 aaPredicted RBP12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 RBAKQ9NYW8 714 aaPredicted RBP12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 L1RE1Q9UN81 338 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 PIAS3Q9Y6X2 628 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
PCYT1A-215ENST00000488235 SLC38A8A6NNN8 435 aa12.1□□□□□ -0.47
PCYT1A-215ENST00000488235 SPTLC2O15270 562 aa12.1□□□□□ -0.47
PCYT1A-215ENST00000488235 LAMTOR5O43504 91 aa12.1□□□□□ -0.47
PCYT1A-215ENST00000488235 EXTL3O43909 919 aa12.1□□□□□ -0.47
PCYT1A-215ENST00000488235 IL18RAPO95256 599 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms