RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ZFYVE26Q68DK2 2539 aa16.72■□□□□ 0.27
MCF2L-228ENST00000487354 ANAPC1Q9H1A4 1944 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 OR6C75A6NL08 312 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 SFI1A8K8P3 1242 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 RPP40O75818 363 aaKnown RBP16.71■□□□□ 0.27
MCF2L-228ENST00000487354 ATF6P18850 670 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 GABRR2P28476 465 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 CYP4F8P98187 520 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 TMEM196Q5HYL7 178 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 RIN3Q8TB24 985 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 DRC1Q96MC2 740 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-228ENST00000487354 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-228ENST00000487354 ATXN3LQ9H3M9 355 aa16.71■□□□□ 0.27
MCF2L-228ENST00000487354 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.27
MCF2L-228ENST00000487354 CCDC163A0A0D9SF12 145 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 KCNK5O95279 499 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 TYMPP19971 482 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 CYP3A5P20815 502 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-228ENST00000487354 CDC25AP30304 524 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-228ENST00000487354 MYBPC2Q14324 1141 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 PDIA5Q14554 519 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 TCEAL6Q6IPX3 200 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 ZPBP2Q6X784 338 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 CACNA2D4Q7Z3S7 1137 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 TMEM150AQ86TG1 271 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 BPIFB1Q8TDL5 484 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 SPIRE2Q8WWL2 714 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 TCEAL3Q969E4 200 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 ZC3H10Q96K80 434 aaKnown RBP16.7■□□□□ 0.26
MCF2L-228ENST00000487354 FAM83CQ9BQN1 747 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
MCF2L-228ENST00000487354 C17orf75Q9HAS0 396 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 PLEKHA5Q9HAU0 1116 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 ASB3Q9Y575 518 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 HELZP42694 1942 aaKnown RBP16.7■□□□□ 0.26
MCF2L-228ENST00000487354 TNRC6BQ9UPQ9 1833 aaKnown RBP16.7■□□□□ 0.26
MCF2L-228ENST00000487354 ATRXP46100 2492 aa16.7■□□□□ 0.26
MCF2L-228ENST00000487354 ABCA7Q8IZY2 2146 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 ADRB2P07550 413 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 GUCY2CP25092 1073 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 ALDH1A3P47895 512 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 MCM2P49736 904 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 CDR1P51861 262 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 ENOX2Q16206 610 aaKnown RBP16.69■□□□□ 0.26
MCF2L-228ENST00000487354 ITPRIPL2Q3MIP1 535 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 NAIF1Q69YI7 327 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-228ENST00000487354 OVOS1Q6IE37 1185 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 C12orf50Q8NA57 414 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-228ENST00000487354 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 TMEM121BQ9BXQ6 578 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-228ENST00000487354 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 TASP1Q9H6P5 420 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 HSFX1Q9UBD0 423 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 UBQLN1Q9UMX0 589 aaKnown RBP16.69■□□□□ 0.26
MCF2L-228ENST00000487354 WASF3Q9UPY6 502 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 CCL26Q9Y258 94 aa16.69■□□□□ 0.26
MCF2L-228ENST00000487354 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 AKAP3O75969 853 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 PLS3P13797 630 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 MPLP40238 635 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 TRAPPC10P48553 1259 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 SAFBQ15424 915 aaKnown RBP eCLIP16.68■□□□□ 0.26
MCF2L-228ENST00000487354 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 FAM200AQ8TCP9 573 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 EZH1Q92800 747 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-228ENST00000487354 KCNN1Q92952 543 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 C8orf76Q96K31 380 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 FBRSL1Q9HCM7 1045 aaKnown RBP16.68■□□□□ 0.26
MCF2L-228ENST00000487354 DNM3Q9UQ16 869 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 PCDHB6Q9Y5E3 794 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 PCDHGA5Q9Y5G8 931 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 THADAQ6YHU6 1953 aa16.68■□□□□ 0.26
MCF2L-228ENST00000487354 DPYSL4O14531 572 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 TRDMT1O14717 391 aaKnown RBP16.67■□□□□ 0.26
MCF2L-228ENST00000487354 EGFP01133 1207 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 PROS1P07225 676 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 CLTAP09496 248 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 LILRA4P59901 499 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 PLK5Q496M5 336 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 USP37Q86T82 979 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 PNMA5Q96PV4 448 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 ZCWPW1Q9H0M4 648 aa16.67■□□□□ 0.26
MCF2L-228ENST00000487354 DUSP15Q9H1R2 295 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-228ENST00000487354 C1QTNF9BB2RNN3 333 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 GIPC1O14908 333 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 CLDN3O15551 220 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 RNF40O75150 1001 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 FGF19O95750 216 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 CYP11A1P05108 521 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 C1QTNF9P0C862 333 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 NCKAP1LP55160 1127 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 STRN3Q13033 797 aa16.66■□□□□ 0.26
MCF2L-228ENST00000487354 ARHGAP15Q53QZ3 475 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms