RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 U2AF2P26368 475 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRIM56-204ENST00000487252 NUCB1Q02818 461 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 GALNT15Q8N3T1 639 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 ASAP3Q8TDY4 903 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 EXOC4Q96A65 974 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 PRIMPOLQ96LW4 560 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 MTRQ99707 1265 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 CRISPLD1Q9H336 500 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 RBM28Q9NW13 759 aaKnown RBP12.84□□□□□ -0.35
TRIM56-204ENST00000487252 MMP17Q9ULZ9 603 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 DOPEY2Q9Y3R5 2298 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 DENND4CQ5VZ89 1909 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 KNTC1P50748 2209 aa12.84□□□□□ -0.35
TRIM56-204ENST00000487252 NID2Q14112 1375 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 EML1O00423 815 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 FGF19O95750 216 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-204ENST00000487252 ARSAP15289 507 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 MCM5P33992 734 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 ARL2P36404 184 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 CSRP3P50461 194 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 SOX4Q06945 474 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-204ENST00000487252 PLD1Q13393 1074 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 PFKFB3Q16875 520 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-204ENST00000487252 CTXN3Q4LDR2 81 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 COLEC12Q5KU26 742 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 LMBRD2Q68DH5 695 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-204ENST00000487252 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 C4orf19Q8IY42 314 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 ETNPPLQ8TBG4 499 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 CD101Q93033 1021 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 PSMG2Q969U7 264 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 SPACA7Q96KW9 195 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 ATXN3LQ9H3M9 355 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 GOLGA2P5Q9HBQ8 144 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 DNMT3LQ9UJW3 386 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 ASB3Q9Y575 518 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 FLNCQ14315 2725 aa12.83□□□□□ -0.36
TRIM56-204ENST00000487252 CYP3A7-CYP3A51PA0A087WV96 503 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 TLX3O43711 291 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-204ENST00000487252 DKC1O60832 514 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRIM56-204ENST00000487252 GLRA2P23416 452 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 CYP3A7P24462 503 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 EPHB3P54753 998 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 SMAD1Q15797 465 aaKnown RBP12.82□□□□□ -0.36
TRIM56-204ENST00000487252 FAM187BQ17R55 369 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 ARHGAP15Q53QZ3 475 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 DNAJB7Q7Z6W7 309 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-204ENST00000487252 RIN3Q8TB24 985 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 WHAMMQ8TF30 809 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 KIF2CQ99661 725 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 SLC46A2Q9BY10 475 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 SEMA4CQ9C0C4 833 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 SMG9Q9H0W8 520 aaKnown RBP12.82□□□□□ -0.36
TRIM56-204ENST00000487252 FZD8Q9H461 694 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 PDZD7Q9H5P4 517 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 IL21Q9HBE4 155 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 C6orf50Q9HD87 102 aa12.82□□□□□ -0.36
TRIM56-204ENST00000487252 A0A1W2PQD8 194 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 K7EQS6 105 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 P4HBP07237 508 aaKnown RBP12.81□□□□□ -0.36
TRIM56-204ENST00000487252 GABRR2P28476 465 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 YWHABP31946 246 aaKnown RBP12.81□□□□□ -0.36
TRIM56-204ENST00000487252 PPP2R5CQ13362 524 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 GLRA4Q5JXX5 417 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 ZNF280DQ6N043 979 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 APOA5Q6Q788 366 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 DBX2Q6ZNG2 339 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 LRRC69Q6ZNQ3 347 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 CMTM8Q8IZV2 173 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 ECT2Q9H8V3 914 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 CCL26Q9Y258 94 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 RELNP78509 3460 aa12.81□□□□□ -0.36
TRIM56-204ENST00000487252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-204ENST00000487252 ANTXRLA6NF34 631 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 ZBTB39O15060 712 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 AP5Z1O43299 807 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 ALDH1A2O94788 518 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 ATXN1LP0C7T5 689 aaKnown RBP12.8□□□□□ -0.36
TRIM56-204ENST00000487252 C6P13671 934 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 GNA11P29992 359 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 BYSLQ13895 437 aaKnown RBP12.8□□□□□ -0.36
TRIM56-204ENST00000487252 PDGFRLQ15198 375 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 XKR4Q5GH76 650 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 FMNL3Q8IVF7 1028 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 NOSTRINQ8IVI9 506 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 USP13Q92995 863 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-204ENST00000487252 SUSD3Q96L08 255 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 PRMT7Q9NVM4 692 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-204ENST00000487252 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-204ENST00000487252 ZMYM5Q9UJ78 669 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 VAV3Q9UKW4 847 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 STK24Q9Y6E0 443 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 NOTCH2Q04721 2471 aa12.8□□□□□ -0.36
TRIM56-204ENST00000487252 SMIM28A0A1B0GU29 152 aa12.79□□□□□ -0.36
TRIM56-204ENST00000487252 FAM149AA5PLN7 773 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms