RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 SOWAHAQ2M3V2 549 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 DSTYKQ6XUX3 929 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 SCARA5Q6ZMJ2 495 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 LIMS2Q7Z4I7 341 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 PPM1KQ8N3J5 372 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 NEK11Q8NG66 645 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 SUSD3Q96L08 255 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 ARID3AQ99856 593 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 VN1R3Q9BXE9 311 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 IMPG2Q9BZV3 1241 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 NIF3L1Q9GZT8 377 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 SMYD3Q9H7B4 428 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 SPG21Q9NZD8 308 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 APEX2Q9UBZ4 518 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 ADAM28Q9UKQ2 775 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 FHOD1Q9Y613 1164 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 SCN1AP35498 2009 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 M0QZQ0 153 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 GRM6O15303 877 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 UCHL3P15374 230 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 SSTR3P32745 418 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-229ENST00000486665 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.222e-8■■■■■ 34.1
HDAC6-229ENST00000486665 POLR2FP61218 127 aaKnown RBP13.68□□□□□ -0.22
HDAC6-229ENST00000486665 TNNC1P63316 161 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 DLX2Q07687 328 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-229ENST00000486665 CUL2Q13617 745 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 ARHGAP44Q17R89 818 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 SPECC1LQ69YQ0 1117 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 TMC6Q7Z403 805 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 CPLX3Q8WVH0 158 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 SAMD11Q96NU1 681 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 MMS19Q96T76 1030 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 MRPL45Q9BRJ2 306 aaKnown RBP13.68□□□□□ -0.22
HDAC6-229ENST00000486665 BCO2Q9BYV7 579 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 TTYH3Q9C0H2 523 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 NLRC4Q9NPP4 1024 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 L1RE1Q9UN81 338 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 PCDHB12Q9Y5F1 795 aa13.68□□□□□ -0.22
HDAC6-229ENST00000486665 TIMM13Q9Y5L4 95 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-229ENST00000486665 ITIH6Q6UXX5 1313 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 CSPG5O95196 566 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 P4HA1P13674 534 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 ACO1P21399 889 aaKnown RBP13.67□□□□□ -0.22
HDAC6-229ENST00000486665 PAX3P23760 479 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 CTNNB1P35222 781 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 GCNT1Q02742 428 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-229ENST00000486665 CLUL1Q15846 466 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 PTPROQ16827 1216 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 WSCD1Q658N2 575 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 FUT10Q6P4F1 479 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 OSTM1Q86WC4 334 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 PDCL2Q8N4E4 241 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 TOP6BLQ8N6T0 577 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 UBR7Q8N806 425 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 KBTBD7Q8WVZ9 684 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
HDAC6-229ENST00000486665 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 GPR88Q9GZN0 384 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 NSUN3Q9H649 340 aaKnown RBP13.67□□□□□ -0.22
HDAC6-229ENST00000486665 CLDND1Q9NY35 253 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 PCDHB8Q9UN66 801 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 ARIH1Q9Y4X5 557 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-229ENST00000486665 NME7Q9Y5B8 376 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 PIEZO1Q92508 2521 aa13.67□□□□□ -0.22
HDAC6-229ENST00000486665 FOXN3O00409 490 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-229ENST00000486665 HCRTO43612 131 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 TRAPPC3O43617 180 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 HUS1O60921 280 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 FGF18O76093 207 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 GYPCP04921 128 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 PNMA6AP0CW24 399 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-229ENST00000486665 CD58P19256 250 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 TKTP29401 623 aaKnown RBP13.66□□□□□ -0.22
HDAC6-229ENST00000486665 CDC25BP30305 580 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 MFAP3P55082 362 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 ZP2Q05996 745 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 GOLGA8FQ08AF8 430 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 GOLGA8DPQ0D2H9 430 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 HYAL1Q12794 435 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 CAMK1Q14012 370 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 DRAP1Q14919 205 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-229ENST00000486665 FIGNQ5HY92 759 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 DPH6Q7L8W6 267 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 RNF168Q8IYW5 571 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-229ENST00000486665 APPL2Q8NEU8 664 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 BAP1Q92560 729 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 TMEM169Q96HH4 297 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 NUP58Q9BVL2 599 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 STK33Q9BYT3 514 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 CYP3A43Q9HB55 503 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 CISHQ9NSE2 258 aa13.66□□□□□ -0.22
HDAC6-229ENST00000486665 FBXL5Q9UKA1 691 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms