RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 GLB1LQ6UWU2 654 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SYNE3Q6ZMZ3 975 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 TRMT1LQ7Z2T5 733 aaKnown RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 WFDC8Q8IUA0 241 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 C1orf210Q8IVY1 113 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SLC44A3Q8N4M1 653 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 DTWD1Q8N5C7 304 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 ZNF713Q8N859 430 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 FANCBQ8NB91 859 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 PPHLN1Q8NEY8 458 aaKnown RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 CMASQ8NFW8 434 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 GPR152Q8TDT2 470 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 RIN2Q8WYP3 895 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 PLD4Q96BZ4 506 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 KLHL5Q96PQ7 755 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SELENOOQ9BVL4 669 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 GCOM2Q9BZD3 368 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 IL25Q9H293 177 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 TBC1D17Q9HA65 648 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 CD248Q9HCU0 757 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 MRPL17Q9NRX2 175 aaKnown RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SSX2IPQ9Y2D8 614 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SIT1Q9Y3P8 196 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 PCDHA10Q9Y5I2 948 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SLC12A7Q9Y666 1083 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 FAM170AA1A519 330 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 SMCO2A6NFE2 343 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 SH2B2O14492 632 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-209ENST00000486618 DHX15O43143 795 aaKnown RBP7.48□□□□□ -1.21
HDAC3-209ENST00000486618 NARSO43776 548 aaKnown RBP7.48□□□□□ -1.21
HDAC3-209ENST00000486618 KINO60870 393 aaKnown RBP7.48□□□□□ -1.21
HDAC3-209ENST00000486618 KRT37O76014 449 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 ALDH2P05091 517 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 CCDC175P0C221 793 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 NAT2P11245 290 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 RXRAP19793 462 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 SFPQP23246 707 aaKnown RBP eCLIP7.48□□□□□ -1.21
HDAC3-209ENST00000486618 TRPC1P48995 793 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 RAB27AP51159 221 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 GPC3P51654 580 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 CLCN4P51793 760 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 TRIM29Q14134 588 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 E2F5Q15329 346 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 NOMO2Q5JPE7 1267 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 SPECC1Q5M775 1068 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 HYIQ5T013 277 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 TWF2Q6IBS0 349 aaKnown RBP7.48□□□□□ -1.21
HDAC3-209ENST00000486618 TMTC3Q6ZXV5 915 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 TTC30AQ86WT1 665 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 BRSK2Q8IWQ3 736 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 LRRC71Q8N4P6 559 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 DCLK2Q8N568 766 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 LINC01465Q8N7H1 131 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 URGCPQ8TCY9 931 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 PGBD4Q96DM1 585 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 SHDQ96IW2 340 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 PGBD1Q96JS3 809 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 ZNF577Q9BSK1 485 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 CCDC94Q9BW85 323 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-209ENST00000486618 RHOBTB2Q9BYZ6 727 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 NRDE2Q9H7Z3 1164 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 WDR6Q9NNW5 1121 aaKnown RBP7.48□□□□□ -1.21
HDAC3-209ENST00000486618 TBC1D13Q9NVG8 400 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 NCDNQ9UBB6 729 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 EPS15L1Q9UBC2 864 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 IP6K2Q9UHH9 426 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 CA14Q9ULX7 337 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 GTF2A1LQ9UNN4 478 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 SAMM50Q9Y512 469 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 MYO15AQ9UKN7 3530 aa7.48□□□□□ -1.21
HDAC3-209ENST00000486618 MIA3Q5JRA6 1907 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 MTCL1Q9Y4B5 1905 aaKnown RBP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 CCDC195A0A1B0GUA6 201 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 GTPBP10A4D1E9 387 aaKnown RBP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 PRR5-ARHGAP8B1AHC4 643 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 ZNF623O75123 536 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 CDC45O75419 566 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 GHRHP01286 108 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 SSBP05455 408 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 URODP06132 367 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 DCNP07585 359 aaKnown RBP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 CYP3A4P08684 503 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 CNPP09543 421 aaKnown RBP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 SCNN1AP37088 669 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 TSPAN7P41732 249 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 SLC11A1P49279 550 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 DNM2P50570 870 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 EPHB1P54762 984 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 ARHGAP8P85298 464 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 NRG1Q02297 640 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 TOMM20Q15388 145 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 ZNF528Q3MIS6 628 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 KIAA0319Q5VV43 1072 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 ARMC3Q5W041 872 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 WWC2Q6AWC2 1192 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 DCLRE1AQ6PJP8 1040 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 DAAM2Q86T65 1068 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 TMEM173Q86WV6 379 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-209ENST00000486618 SUMF1Q8NBK3 374 aa7.47□□□□□ -1.21
HDAC3-209ENST00000486618 OR13H1Q8NG92 308 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms