RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 INSL5Q9Y5Q6 135 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 C2CD4DB7Z1M9 353 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 PHACTR2O75167 634 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 CST3P01034 146 aaPredicted RBP19.55■□□□□ 0.72
COL1A1-207ENST00000486572 LRG1P02750 347 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 KRT13P13646 458 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 VAMP7P51809 220 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 LRRC63Q05C16 580 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 MORC3Q14149 939 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 TDRD10Q5VZ19 366 aaKnown RBP19.55■□□□□ 0.72
COL1A1-207ENST00000486572 OTOP3Q7RTS5 596 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 RNF135Q8IUD6 432 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 ADGRF2Q8IZF7 708 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 SPATA18Q8TC71 538 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 PGLYRP2Q96PD5 576 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 TMEM209Q96SK2 561 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 MKNK1Q9BUB5 465 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 ZCWPW1Q9H0M4 648 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 POLIQ9UNA4 740 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 MUC3AQ02505 3323 aa19.55■□□□□ 0.72
COL1A1-207ENST00000486572 MTMR11A4FU01 709 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 BIN1O00499 593 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 IKBKBO14920 756 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 CETN3O15182 167 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 STAU1O95793 577 aaKnown RBP19.54■□□□□ 0.72
COL1A1-207ENST00000486572 BMP6P22004 513 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 ENPEPQ07075 957 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 CAMK4Q16566 473 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 SOWAHAQ2M3V2 549 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 SLC39A12Q504Y0 691 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 DPH6Q7L8W6 267 aa19.54■□□□□ 0.72
COL1A1-207ENST00000486572 GRASPQ7Z6J2 395 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-207ENST00000486572 KHSRPQ92945 711 aaKnown RBP eCLIP19.54■□□□□ 0.72
COL1A1-207ENST00000486572 SYAP1Q96A49 352 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-207ENST00000486572 ACSF2Q96CM8 615 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-207ENST00000486572 DHTKD1Q96HY7 919 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-207ENST00000486572 VNN2O95498 520 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 C4BPAP04003 597 aaKnown RBP19.53■□□□□ 0.72
COL1A1-207ENST00000486572 EPB41P11171 864 aaKnown RBP19.53■□□□□ 0.72
COL1A1-207ENST00000486572 CD44P16070 742 aaKnown RBP19.53■□□□□ 0.72
COL1A1-207ENST00000486572 CCNE1P24864 410 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 ATICP31939 592 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 LHX1P48742 406 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 PMS1P54277 932 aaKnown RBP19.53■□□□□ 0.72
COL1A1-207ENST00000486572 MYL6P60660 151 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 FKBP3Q00688 224 aaKnown RBP19.53■□□□□ 0.72
COL1A1-207ENST00000486572 MYL7Q01449 175 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 ZACNQ401N2 412 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 C1orf220Q5T0J3 134 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 ANKRD40Q6AI12 368 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 LIMS2Q7Z4I7 341 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 PLCD3Q8N3E9 789 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 TRIML1Q8N9V2 468 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 EEF2KMTQ96G04 330 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 MMS19Q96T76 1030 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 XYLT2Q9H1B5 865 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 DDX43Q9NXZ2 648 aaKnown RBP19.53■□□□□ 0.72
COL1A1-207ENST00000486572 KIAA1468Q9P260 1216 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 YIPF1Q9Y548 306 aa19.53■□□□□ 0.72
COL1A1-207ENST00000486572 TRIM49BA6NDI0 452 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 GABRDO14764 452 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 SLC16A3O15427 465 aaKnown RBP19.52■□□□□ 0.72
COL1A1-207ENST00000486572 TNNC1P63316 161 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 TSPY1Q01534 308 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 SMARCB1Q12824 385 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 NCOA4Q13772 614 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 WDR72Q3MJ13 1102 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 SV2AQ7L0J3 742 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 GET4Q7L5D6 327 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-207ENST00000486572 ZC3H3Q8IXZ2 948 aaKnown RBP19.52■□□□□ 0.72
COL1A1-207ENST00000486572 DCP1BQ8IZD4 617 aaKnown RBP19.52■□□□□ 0.72
COL1A1-207ENST00000486572 ZDHHC14Q8IZN3 488 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 ATAD1Q8NBU5 361 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 C2orf15Q8WU43 125 aaKnown RBP19.52■□□□□ 0.72
COL1A1-207ENST00000486572 ACBD6Q9BR61 282 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 CRISPLD1Q9H336 500 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 CLSTN2Q9H4D0 955 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 LMBRD1Q9NUN5 540 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 HCFC1R1Q9NWW0 138 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 HSFX1Q9UBD0 423 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 MUTYHQ9UIF7 546 aa19.52■□□□□ 0.72
COL1A1-207ENST00000486572 PPP1R3GB7ZBB8 358 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 DCXO43602 365 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 CLSTN1O94985 981 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 VNN1O95497 513 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 TRIM49P0CI25 452 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 TRIM49CP0CI26 452 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 FSHRP23945 695 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 PCSK1P29120 753 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 GBP2P32456 591 aaPredicted RBP19.51■□□□□ 0.71
COL1A1-207ENST00000486572 NTHL1P78549 312 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 TWF1Q12792 350 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 DUSP4Q13115 394 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 PLD1Q13393 1074 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 ZNF699Q32M78 642 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 PABPC1LQ4VXU2 614 aaKnown RBP19.51■□□□□ 0.71
COL1A1-207ENST00000486572 KLHL10Q6JEL2 608 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 LRRTM3Q86VH5 581 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 OSTM1Q86WC4 334 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 ELMOD1Q8N336 334 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms