RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 PNPLA4P41247 253 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 TNNC1P63316 161 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 NOMO3P69849 1222 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 INCA1Q0VD86 236 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 PTK7Q13308 1070 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 GLE1Q53GS7 698 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 UBXN11Q5T124 520 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 MON1BQ7L1V2 547 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 UBL4BQ8N7F7 174 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 USP38Q8NB14 1042 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 TMEM35BQ8NCS4 154 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 ZNF564Q8TBZ8 553 aaPredicted RBP12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 ACTRT1Q8TDG2 376 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 COG1Q8WTW3 980 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 TMEM40Q8WWA1 233 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 TSC1Q92574 1164 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 DPF3Q92784 378 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 CAPZA3Q96KX2 299 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 NUP85Q9BW27 656 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 EIF2AQ9BY44 585 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 WNT8AQ9H1J5 351 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 OSGEPQ9NPF4 335 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 ACP6Q9NPH0 428 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 NXF1Q9UBU9 619 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 TTC7AQ9ULT0 858 aaPredicted RBP12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 CDY2AQ9Y6F7 541 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 SCINQ9Y6U3 715 aa12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 V9GYY5 206 aaPredicted RBP12.56□□□□□ -0.4
ERGIC3-215ENST00000486268 KIAA0355O15063 1070 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 CILPO75339 1184 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 RECQL4O94761 1208 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 H2AFXP16104 143 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 SLC1A1P43005 524 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 RAB27AP51159 221 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 TAP1Q03518 808 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 MGAT3Q09327 533 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 NAA30Q147X3 362 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 BRD3Q15059 726 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 TRAF7Q6Q0C0 670 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 FAM228AQ86W67 206 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 RASGEF1CQ8N431 466 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 SPATA4Q8NEY3 305 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 ELMO3Q96BJ8 720 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 NAP1L3Q99457 506 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 TRAIPQ9BWF2 469 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 CARD9Q9H257 536 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 PRDM5Q9NQX1 630 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 TMEM39AQ9NV64 488 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 ADAM22Q9P0K1 906 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 STRIP2Q9ULQ0 834 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 BARX2Q9UMQ3 279 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 COG5Q9UP83 839 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 ALG6Q9Y672 507 aa12.55□□□□□ -0.4
ERGIC3-215ENST00000486268 KCNK3O14649 394 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 ZNF185O15231 689 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 WEE2P0C1S8 567 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 VDRP11473 427 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 SYN1P17600 705 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 CD58P19256 250 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 CTNNA2P26232 953 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 PPP2R5EQ16537 467 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 FAM26DQ5JW98 314 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 NAA35Q5VZE5 725 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 TWF2Q6IBS0 349 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 DNAAF5Q86Y56 855 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 CYFIP2Q96F07 1278 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 PLVAPQ9BX97 442 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 PPP1R12CQ9BZL4 782 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 MIS12Q9H081 205 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 SLC38A7Q9NVC3 462 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 PARVAQ9NVD7 372 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 RAB21Q9UL25 225 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 NOD1Q9Y239 953 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 NOC2LQ9Y3T9 749 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 IPPQ9Y573 584 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 CEP290O15078 2479 aa12.54□□□□□ -0.4
ERGIC3-215ENST00000486268 SMIM28A0A1B0GU29 152 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 CCDC66A2RUB6 948 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 CCDC151A5D8V7 595 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 CCDC188H7C350 402 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 PGRMC1O00264 195 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 PDE2AO00408 941 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 PIRO00625 290 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 ATP8B1O43520 1251 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 ERLIN1O75477 346 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 CKBP12277 381 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 SKIP12755 728 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 MMP8P22894 467 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 PAX3P23760 479 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 CYP2C18P33260 490 aa12.53□□□□□ -0.4
ERGIC3-215ENST00000486268 RAD23BP54727 409 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms