RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 CACNA2D4Q7Z3S7 1137 aa17.56■□□□□ 0.4
PDE6D-205ENST00000486044 LRRC3BQ96PB8 259 aa17.56■□□□□ 0.4
PDE6D-205ENST00000486044 MKNK1Q9BUB5 465 aa17.56■□□□□ 0.4
PDE6D-205ENST00000486044 LARSQ9P2J5 1176 aaKnown RBP17.56■□□□□ 0.4
PDE6D-205ENST00000486044 ANGPTL2Q9UKU9 493 aa17.56■□□□□ 0.4
PDE6D-205ENST00000486044 CHD8Q9HCK8 2581 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 AXIN1O15169 862 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 RPP40O75818 363 aaKnown RBP17.55■□□□□ 0.4
PDE6D-205ENST00000486044 ZNF806P0C7X5 589 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 SCP2P22307 547 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 U2AF2P26368 475 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDE6D-205ENST00000486044 CDC25AP30304 524 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 CDC25CP30307 473 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 AMPD2Q01433 879 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 RAD51AP2Q09MP3 1159 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 SYT2Q8N9I0 419 aaPredicted RBP17.55■□□□□ 0.4
PDE6D-205ENST00000486044 GAB3Q8WWW8 586 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 TMEM209Q96SK2 561 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 ARRDC1-AS1Q9H2J1 176 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 RPF1Q9H9Y2 349 aaKnown RBP17.55■□□□□ 0.4
PDE6D-205ENST00000486044 PCDHB6Q9Y5E3 794 aa17.55■□□□□ 0.4
PDE6D-205ENST00000486044 MYH11P35749 1972 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 LACTBL1A8MY62 500 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 MCM2P49736 904 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 LIG4P49917 911 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 TOB1P50616 345 aaPredicted RBP17.54■□□□□ 0.4
PDE6D-205ENST00000486044 LILRA4P59901 499 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 GRSF1Q12849 480 aaKnown RBP eCLIP17.54■□□□□ 0.4
PDE6D-205ENST00000486044 WDR44Q5JSH3 913 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 KCNK18Q7Z418 384 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 CD302Q8IX05 232 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 SENP8Q96LD8 212 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 SEPT5Q99719 369 aaPredicted RBP17.54■□□□□ 0.4
PDE6D-205ENST00000486044 MMTAG2Q9BU76 263 aaKnown RBP17.54■□□□□ 0.4
PDE6D-205ENST00000486044 C2orf42Q9NWW7 574 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 DSEQ9UL01 958 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 SLC8A2Q9UPR5 921 aa17.54■□□□□ 0.4
PDE6D-205ENST00000486044 NUP210Q8TEM1 1887 aaPredicted RBP17.54■□□□□ 0.4
PDE6D-205ENST00000486044 OGTO15294 1046 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 EXTL3O43909 919 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 AKAP3O75969 853 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 TNFSF9P41273 254 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 CACNB1Q02641 598 aaPredicted RBP17.53■□□□□ 0.4
PDE6D-205ENST00000486044 TNK2Q07912 1038 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 SMARCB1Q12824 385 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 SF3A2Q15428 464 aaKnown RBP17.53■□□□□ 0.4
PDE6D-205ENST00000486044 MGAT5BQ3V5L5 792 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 SPATA1Q5VX52 437 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 METTL23Q86XA0 190 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 TTC9BQ8N6N2 239 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 EXOC4Q96A65 974 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 CDK5RAP3Q96JB5 506 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 HAPLN2Q9GZV7 340 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 GKN1Q9NS71 199 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 PCDHGA5Q9Y5G8 931 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 GREB1Q4ZG55 1949 aa17.53■□□□□ 0.4
PDE6D-205ENST00000486044 HNRNPDLO14979 420 aaKnown RBP17.52■□□□□ 0.4
PDE6D-205ENST00000486044 SOAT2O75908 522 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 EPN2O95208 641 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 PRAMEF12O95522 483 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 RAP1GAPP47736 663 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 ENOX2Q16206 610 aaKnown RBP17.52■□□□□ 0.4
PDE6D-205ENST00000486044 IL17AQ16552 155 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 SLC39A12Q504Y0 691 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 HYIQ5T013 277 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 N4BP2L1Q5TBK1 243 aaPredicted RBP17.52■□□□□ 0.4
PDE6D-205ENST00000486044 THEM5Q8N1Q8 247 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 CAMKK1Q8N5S9 505 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 C2orf15Q8WU43 125 aaKnown RBP17.52■□□□□ 0.4
PDE6D-205ENST00000486044 FAM212AQ96EL1 285 aa17.52■□□□□ 0.4
PDE6D-205ENST00000486044 ZSCAN31Q96LW9 406 aaPredicted RBP17.52■□□□□ 0.4
PDE6D-205ENST00000486044 CNOT1A5YKK6 2376 aaKnown RBP17.52■□□□□ 0.39
PDE6D-205ENST00000486044 TM4SF5O14894 197 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 CYP11A1P05108 521 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 ADRB2P07550 413 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 PLA2G4BP0C869 781 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 PMLP29590 882 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 AVPR1AP37288 418 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 GUCY2FP51841 1108 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 SLC12A3P55017 1021 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 NCKAP1LP55160 1127 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 SHC2P98077 582 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 CYP4F8P98187 520 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 BFSP1Q12934 665 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 RUNX3Q13761 415 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 TMEM196Q5HYL7 178 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 STPG1Q5TH74 334 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 C9orf57Q5W0N0 161 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 KBTBD6Q86V97 674 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 CMTM8Q8IZV2 173 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 TMEM130Q8N3G9 435 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 KCNN1Q92952 543 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 LPIN3Q9BQK8 851 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 SLC46A2Q9BY10 475 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 SH2B1Q9NRF2 756 aaPredicted RBP17.51■□□□□ 0.39
PDE6D-205ENST00000486044 ODF2LQ9ULJ1 636 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 TBX20Q9UMR3 447 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 SPAG17Q6Q759 2223 aa17.51■□□□□ 0.39
PDE6D-205ENST00000486044 SDK1Q7Z5N4 2213 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms