RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 LRIT3Q3SXY7 679 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 INTS8Q75QN2 995 aaKnown RBP6.08□□□□□ -1.44
COPS3-208ENST00000486032 FAM114A1Q8IWE2 563 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 DHX40Q8IX18 779 aaKnown RBP6.08□□□□□ -1.44
COPS3-208ENST00000486032 EFCAB13Q8IY85 973 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 FIBCD1Q8N539 461 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 BEST2Q8NFU1 509 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 OR5B17Q8NGF7 314 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 PHOSPHO2Q8TCD6 241 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 CACTINQ8WUQ7 758 aaKnown RBP6.08□□□□□ -1.44
COPS3-208ENST00000486032 ELMO3Q96BJ8 720 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 RAD9AQ99638 391 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 CGRRF1Q99675 332 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 ARHGAP9Q9BRR9 750 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 TRAIPQ9BWF2 469 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 MTMR12Q9C0I1 747 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 VPS16Q9H269 839 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 THAP9Q9H5L6 903 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 NRDE2Q9H7Z3 1164 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 TBC1D13Q9NVG8 400 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 DNAJB4Q9UDY4 337 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 ARMCX3Q9UH62 379 aaPredicted RBP6.08□□□□□ -1.44
COPS3-208ENST00000486032 MSRAQ9UJ68 235 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 UBQLN1Q9UMX0 589 aaKnown RBP6.08□□□□□ -1.44
COPS3-208ENST00000486032 INSL6Q9Y581 213 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 MRPL42Q9Y6G3 142 aaKnown RBP6.08□□□□□ -1.44
COPS3-208ENST00000486032 COL6A3P12111 3177 aa6.08□□□□□ -1.44
COPS3-208ENST00000486032 TDRD15B5MCY1 1934 aaKnown RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 PTPRJQ12913 1337 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 PODXLO00592 558 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 PPEF2O14830 753 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 SLC16A3O15427 465 aaKnown RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 B4GALT3O60512 393 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 GNA14O95837 355 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 SERPINC1P01008 464 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 ITGB3P05106 788 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 TPM2P07951 284 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 POLR2BP30876 1174 aaKnown RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 CTNNB1P35222 781 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 PIK3CAP42336 1068 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 SLC11A1P49279 550 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 CLCNKBP51801 687 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 SOX4Q06945 474 aaPredicted RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 TUSC3Q13454 348 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 TRPC3Q13507 836 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 ADGRE1Q14246 886 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 HSP90AA2PQ14568 343 aaPredicted RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 NCAPHQ15003 741 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 IQCB1Q15051 598 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 DUOXA2Q1HG44 320 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 CT47A1Q5JQC4 288 aaPredicted RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 SCARA3Q6AZY7 606 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 ALKAL1Q6UXT8 129 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 FRMD5Q7Z6J6 570 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 USP37Q86T82 979 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 GAS2L3Q86XJ1 694 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 CD302Q8IX05 232 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 ZC3H3Q8IXZ2 948 aaKnown RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 CMTR2Q8IYT2 770 aaKnown RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 LRRC43Q8N309 656 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 GSTCDQ8NEC7 633 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 ANKRD20A12PQ8NF67 263 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 FAM200AQ8TCP9 573 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 PARD3BQ8TEW8 1205 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 TSC1Q92574 1164 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 ZNF689Q96CS4 500 aaPredicted RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 MFSD14AQ96MC6 490 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 FBXL18Q96ME1 805 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 PCMTD1Q96MG8 357 aaPredicted RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 BPIFA3Q9BQP9 254 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 PAAF1Q9BRP4 392 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 TUBGCP2Q9BSJ2 902 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 ANP32EQ9BTT0 268 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 MKNK1Q9BUB5 465 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 MRPL9Q9BYD2 267 aaKnown RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 RBSNQ9H1K0 784 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 ASB7Q9H672 318 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 CWH43Q9H720 699 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 PLEKHA5Q9HAU0 1116 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 METTL14Q9HCE5 456 aaKnown RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 INTS13Q9NVM9 706 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 DPP3Q9NY33 737 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 CNTN3Q9P232 1028 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 KANSL3Q9P2N6 904 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 AGAP1Q9UPQ3 857 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 FAN1Q9Y2M0 1017 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 NUB1Q9Y5A7 615 aa6.07□□□□□ -1.44
COPS3-208ENST00000486032 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.07□□□□□ -1.44
COPS3-208ENST00000486032 FNDC1Q4ZHG4 1894 aaPredicted RBP6.07□□□□□ -1.44
COPS3-208ENST00000486032 LINC01553A4QN01 128 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 F8W810 466 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 I3L4J1 428 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 NRP1O14786 923 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 IKBKBO14920 756 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 STX10O60499 249 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 TADA2AO75478 443 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 B3GAT3O94766 335 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 CST3P01034 146 aaPredicted RBP6.06□□□□□ -1.44
COPS3-208ENST00000486032 AFPP02771 609 aaKnown RBP6.06□□□□□ -1.44
COPS3-208ENST00000486032 ALDH2P05091 517 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms