RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 TCEAL8Q8IYN2 117 aa17.44■□□□□ 0.38
DDR1-246ENST00000485023 ADGRF2Q8IZF7 708 aa17.44■□□□□ 0.38
DDR1-246ENST00000485023 TTC9BQ8N6N2 239 aa17.44■□□□□ 0.38
DDR1-246ENST00000485023 ATAD1Q8NBU5 361 aa17.44■□□□□ 0.38
DDR1-246ENST00000485023 TSG101Q99816 390 aa17.44■□□□□ 0.38
DDR1-246ENST00000485023 OXCT2Q9BYC2 517 aaPredicted RBP17.44■□□□□ 0.38
DDR1-246ENST00000485023 DDX43Q9NXZ2 648 aaKnown RBP17.44■□□□□ 0.38
DDR1-246ENST00000485023 SLC27A5Q9Y2P5 690 aa17.44■□□□□ 0.38
DDR1-246ENST00000485023 YIPF1Q9Y548 306 aa17.44■□□□□ 0.38
DDR1-246ENST00000485023 MTMR11A4FU01 709 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 N4BP1O75113 896 aaKnown RBP17.43■□□□□ 0.38
DDR1-246ENST00000485023 SOAT2O75908 522 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 ASGR2P07307 311 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
DDR1-246ENST00000485023 FSHRP23945 695 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 HOXA9P31269 272 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 VAMP7P51809 220 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 MYL6P60660 151 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 TWF1Q12792 350 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 DUSP4Q13115 394 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 GPR17Q13304 367 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 NFIL3Q16649 462 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 CCDC142Q17RM4 750 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 UVSSAQ2YD98 709 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 CYP26C1Q6V0L0 522 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 ELOA2Q8IYF1 753 aaPredicted RBP17.43■□□□□ 0.38
DDR1-246ENST00000485023 ADSSL1Q8N142 457 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 ST13P5Q8NFI4 369 aaPredicted RBP17.43■□□□□ 0.38
DDR1-246ENST00000485023 TMEM174Q8WUU8 243 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 ACSF2Q96CM8 615 aaPredicted RBP17.43■□□□□ 0.38
DDR1-246ENST00000485023 MYADMQ96S97 322 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 MMS19Q96T76 1030 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 ZCWPW1Q9H0M4 648 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.43■□□□□ 0.38
DDR1-246ENST00000485023 GDAP2Q9NXN4 497 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 RAPGEFL1Q9UHV5 662 aa17.43■□□□□ 0.38
DDR1-246ENST00000485023 BDP1A6H8Y1 2624 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 DCXO43602 365 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 KRT13P13646 458 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 PSMC2P35998 433 aaKnown RBP17.42■□□□□ 0.38
DDR1-246ENST00000485023 TNNC1P63316 161 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 STIM1Q13586 685 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 SOWAHAQ2M3V2 549 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 EDRF1Q3B7T1 1238 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 PABPC1LQ4VXU2 614 aaKnown RBP17.42■□□□□ 0.38
DDR1-246ENST00000485023 C1orf220Q5T0J3 134 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 ANKRD40Q6AI12 368 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 OTOP3Q7RTS5 596 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 TOP6BLQ8N6T0 577 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 ING5Q8WYH8 240 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 SEPT5Q99719 369 aaPredicted RBP17.42■□□□□ 0.38
DDR1-246ENST00000485023 CORO1BQ9BR76 489 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 RHOBTB2Q9BYZ6 727 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 ABI2Q9NYB9 513 aaPredicted RBP17.42■□□□□ 0.38
DDR1-246ENST00000485023 DNMT3BQ9UBC3 853 aaKnown RBP17.42■□□□□ 0.38
DDR1-246ENST00000485023 NXF1Q9UBU9 619 aaKnown RBP17.42■□□□□ 0.38
DDR1-246ENST00000485023 LIMD1Q9UGP4 676 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 CTNND2Q9UQB3 1225 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 USTQ9Y2C2 406 aa17.42■□□□□ 0.38
DDR1-246ENST00000485023 MTCL1Q9Y4B5 1905 aaKnown RBP17.42■□□□□ 0.38
DDR1-246ENST00000485023 FAM86C2PA6NEL3 165 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 PSMA7O14818 248 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 CETN3O15182 167 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 PAPLNO95428 1278 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 C4BPAP04003 597 aaKnown RBP17.41■□□□□ 0.38
DDR1-246ENST00000485023 BMP6P22004 513 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 GCLMP48507 274 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 MYL7Q01449 175 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 TSPY1Q01534 308 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 NCOA4Q13772 614 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 MORC3Q14149 939 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 ZNF699Q32M78 642 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 WDR72Q3MJ13 1102 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 COBLL1Q53SF7 1204 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 CENPPQ6IPU0 288 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 SCARA5Q6ZMJ2 495 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 INTS8Q75QN2 995 aaKnown RBP17.41■□□□□ 0.38
DDR1-246ENST00000485023 LRRTM3Q86VH5 581 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 TMEM86AQ8N2M4 240 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 ITFG1Q8TB96 612 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 TMC2Q8TDI7 906 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 KBTBD7Q8WVZ9 684 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 MRPL45Q9BRJ2 306 aaKnown RBP17.41■□□□□ 0.38
DDR1-246ENST00000485023 TMLHEQ9NVH6 421 aa17.41■□□□□ 0.38
DDR1-246ENST00000485023 VNN1O95497 513 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 RHOP08100 348 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 EPB41P11171 864 aaKnown RBP17.4■□□□□ 0.38
DDR1-246ENST00000485023 PIK3CAP42336 1068 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 RAP1GAPP47736 663 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 AP3M2P53677 418 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 PSMC1P62191 440 aaKnown RBP17.4■□□□□ 0.38
DDR1-246ENST00000485023 CLDN10P78369 228 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 MGAT5BQ3V5L5 792 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 SV2AQ7L0J3 742 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 ZDHHC14Q8IZN3 488 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 HS6ST3Q8IZP7 471 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 ELMOD1Q8N336 334 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 SYAP1Q96A49 352 aaPredicted RBP17.4■□□□□ 0.38
DDR1-246ENST00000485023 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
DDR1-246ENST00000485023 XYLT2Q9H1B5 865 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms