RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 FAM124BQ9H5Z6 455 aaPredicted RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 DDX20Q9UHI6 824 aaKnown RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 TMEM59LQ9UK28 342 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 HTTP42858 3142 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 ZRANB2O95218 330 aaKnown RBP eCLIP17.76■□□□□ 0.434e-10■■■■■ 65.3
CTSA-207ENST00000484855 CDH5P33151 784 aaPredicted RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 MARCKSL1P49006 195 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 INCA1Q0VD86 236 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 GLE1Q53GS7 698 aaKnown RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 CPNE8Q86YQ8 564 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 TTC39CQ8N584 583 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 LRRC52Q8N7C0 313 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 SMG8Q8ND04 991 aaKnown RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 CD101Q93033 1021 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 RNPC3Q96LT9 517 aaKnown RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 KRT12Q99456 494 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 TRIM7Q9C029 511 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 RNF39Q9H2S5 420 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 RNF19AQ9NV58 838 aa17.76■□□□□ 0.43
CTSA-207ENST00000484855 TTC7AQ9ULT0 858 aaPredicted RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 BARX2Q9UMQ3 279 aaPredicted RBP17.76■□□□□ 0.43
CTSA-207ENST00000484855 MYO1FO00160 1098 aa17.75■□□□□ 0.43
CTSA-207ENST00000484855 PPEF2O14830 753 aa17.75■□□□□ 0.43
CTSA-207ENST00000484855 XPOTO43592 962 aaKnown RBP17.75■□□□□ 0.43
CTSA-207ENST00000484855 CTNNA2P26232 953 aa17.75■□□□□ 0.43
CTSA-207ENST00000484855 CTNNA1P35221 906 aaKnown RBP17.75■□□□□ 0.43
CTSA-207ENST00000484855 PLEKHA7Q6IQ23 1121 aa17.75■□□□□ 0.43
CTSA-207ENST00000484855 DENND1BQ6P3S1 775 aa17.75■□□□□ 0.43
CTSA-207ENST00000484855 RUBCNQ92622 972 aa17.75■□□□□ 0.43
CTSA-207ENST00000484855 TSPAN18Q96SJ8 248 aa17.75■□□□□ 0.43
CTSA-207ENST00000484855 PARVAQ9NVD7 372 aa17.75■□□□□ 0.43
CTSA-207ENST00000484855 SMIM28A0A1B0GU29 152 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 CCDC66A2RUB6 948 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 KRIT1O00522 736 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 ZMYND10O75800 440 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 FGGP02679 453 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 CHRNA1P02708 482 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 KCNE1P15382 129 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 MAP2K2P36507 400 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 MRPS25P82663 173 aaKnown RBP17.74■□□□□ 0.43
CTSA-207ENST00000484855 MGAT3Q09327 533 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 ZNF211Q13398 564 aaPredicted RBP17.74■□□□□ 0.43
CTSA-207ENST00000484855 MAMLD1Q13495 774 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 PTGISQ16647 500 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 XKR4Q5GH76 650 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 C9orf57Q5W0N0 161 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 RNF180Q86T96 592 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 RPAINQ86UA6 219 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 AP1M1Q9BXS5 423 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 ST3GAL5Q9UNP4 418 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 SNX9Q9Y5X1 595 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 GRIN2DO15399 1336 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 RRP9O43818 475 aaKnown RBP17.74■□□□□ 0.43
CTSA-207ENST00000484855 CD4P01730 458 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 ATF7P17544 494 aaPredicted RBP17.74■□□□□ 0.43
CTSA-207ENST00000484855 NDST1P52848 882 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 NFX1Q12986 1120 aaKnown RBP17.74■□□□□ 0.43
CTSA-207ENST00000484855 LONRF2Q1L5Z9 754 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 ERICH1Q86X53 443 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 WDTC1Q8N5D0 677 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 PXYLP1Q8TE99 480 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 HDAC7Q8WUI4 952 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 NAP1L3Q99457 506 aaPredicted RBP17.74■□□□□ 0.43
CTSA-207ENST00000484855 LHX5Q9H2C1 402 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 STIM2Q9P246 746 aa17.74■□□□□ 0.43
CTSA-207ENST00000484855 DMGDHQ9UI17 866 aaKnown RBP17.74■□□□□ 0.43
CTSA-207ENST00000484855 CCDC188H7C350 402 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 VDRP11473 427 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 THPOP40225 353 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 SLC1A1P43005 524 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 PEX5P50542 639 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 SLC7A5Q01650 507 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 CLUL1Q15846 466 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 SEL1L2Q5TEA6 688 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 KLHL7Q8IXQ5 586 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 PCDHA3Q9Y5H8 950 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 GNRH1P01148 92 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 VEGFBP49765 207 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 BEND6Q5SZJ8 279 aaPredicted RBP17.73■□□□□ 0.43
CTSA-207ENST00000484855 DNAJC24Q6P3W2 148 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 ARRDC4Q8NCT1 418 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 HEXIM2Q96MH2 286 aaKnown RBP17.73■□□□□ 0.43
CTSA-207ENST00000484855 ZNF560Q96MR9 790 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 NT5C1AQ9BXI3 368 aa17.73■□□□□ 0.43
CTSA-207ENST00000484855 CABYRO75952 493 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 PROSCO94903 275 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 ITGA7Q13683 1181 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 MAP9Q49MG5 647 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 SGO2Q562F6 1265 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 FEZF2Q8TBJ5 459 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 STRIP2Q9ULQ0 834 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTSA-207ENST00000484855 NOD1Q9Y239 953 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 M0QYV0 167 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 PIRO00625 290 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 GPR182O15218 404 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 MICAL2O94851 1124 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 GJB6O95452 261 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 ITGA4P13612 1032 aa17.72■□□□□ 0.43
CTSA-207ENST00000484855 RWDD2BP57060 319 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms