RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SCNM1Q9BWG6 230 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 TM6SF1Q9BZW5 370 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 BHMT2Q9H2M3 363 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 BRMS1Q9HCU9 246 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 BCLAF3A2AJT9 711 aaKnown RBP11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 MTMR11A4FU01 709 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 PATE3B3GLJ2 98 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 TRDMT1O14717 391 aaKnown RBP11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 ATG13O75143 517 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 LARGE1O95461 756 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.512e-8■■■■■ 31.7
SMARCC1-205ENST00000483847 MCM2P49736 904 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 GRSF1Q12849 480 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 ELF2Q15723 593 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 LRSAM1Q6UWE0 723 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 MPZL3Q6UWV2 235 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 CAMKK1Q8N5S9 505 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 RIN3Q8TB24 985 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 ZCCHC14Q8WYQ9 949 aaKnown RBP11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 EZH1Q92800 747 aaPredicted RBP11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 SLC46A2Q9BY10 475 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 MRPL4Q9BYD3 311 aaKnown RBP11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 EBF3Q9H4W6 596 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 TASP1Q9H6P5 420 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 IL21Q9HBE4 155 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 LHX6Q9UPM6 363 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 CCL26Q9Y258 94 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 INVSQ9Y283 1065 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 ASB3Q9Y575 518 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 NUP205Q92621 2012 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 IGSF10Q6WRI0 2623 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 FREM2Q5SZK8 3169 aa11.85□□□□□ -0.51
SMARCC1-205ENST00000483847 KIAA1549LQ6ZVL6 1849 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 TMEM8BA6NDV4 472 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 OR6C75A6NL08 312 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 CDX4O14627 284 aaPredicted RBP11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 PPEF2O14830 753 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 ARSAP15289 507 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 ATF6P18850 670 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 WEE1P30291 646 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 AARSP49588 968 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 GUCY2FP51841 1108 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 RUNX3Q13761 415 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 ARHGAP15Q53QZ3 475 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 DAB2IPQ5VWQ8 1189 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 KIAA1211LQ6NV74 962 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 CENPQQ7L2Z9 268 aaPredicted RBP11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 USP37Q86T82 979 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 NECAB1Q8N987 351 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 WASF1Q92558 559 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 TMEM134Q9H6X4 195 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 THG1LQ9NWX6 298 aaKnown RBP11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 ARHGAP28Q9P2N2 729 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 ANKFY1Q9P2R3 1169 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 MYO16Q9Y6X6 1858 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 ABCA7Q8IZY2 2146 aa11.84□□□□□ -0.51
SMARCC1-205ENST00000483847 TSC2P49815 1807 aa11.83□□□□□ -0.51
SMARCC1-205ENST00000483847 ANK1P16157 1881 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 RHOBTB1O94844 696 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 FGF19O95750 216 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 CXCL8P10145 99 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 CEACAM1P13688 526 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 CSRP1P21291 193 aaKnown RBP11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 LRPAP1P30533 357 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 GBP1P32455 592 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 CCT6AP40227 531 aaKnown RBP11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 GALK1P51570 392 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 MAPK7Q13164 816 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 OVOS1Q6IE37 1185 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 CMTM8Q8IZV2 173 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 DEFB124Q8NES8 71 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 OR10T2Q8NGX3 314 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 RPLP0P6Q8NHW5 317 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 OXCT2Q9BYC2 517 aaPredicted RBP11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 HAPLN2Q9GZV7 340 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 TMEM9BQ9NQ34 198 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 KMT5AQ9NQR1 393 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 KIAA1024Q9UPX6 916 aa11.83□□□□□ -0.52
SMARCC1-205ENST00000483847 DENND4CQ5VZ89 1909 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 LAMA5O15230 3695 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 SFI1A8K8P3 1242 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 SLC16A4O15374 487 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 HYAL3O43820 417 aaPredicted RBP11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 HIP1RO75146 1068 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 APBB3O95704 486 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 OR52Z1P0C646 297 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 NMT1P30419 496 aaKnown RBP11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 IRX4P78413 519 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 MYBPC2Q14324 1141 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 DMC1Q14565 340 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 NOLC1Q14978 699 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 PTPAQ15257 358 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 ZNF174Q15697 407 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 ZBTB6Q15916 424 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 UAP1L1Q3KQV9 507 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 SYT13Q7L8C5 426 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms