RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 C3orf58Q8NDZ4 430 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 KBTBD7Q8WVZ9 684 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 ZNF592Q92610 1267 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 RABGGTAQ92696 567 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 CYFIP2Q96F07 1278 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 TMEM176AQ96HP8 235 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 ZNF560Q96MR9 790 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 MMS19Q96T76 1030 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 FAM124BQ9H5Z6 455 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-226ENST00000483656 ELAC1Q9H777 363 aaKnown RBP10.77□□□□□ -0.69
HDAC6-226ENST00000483656 LUC7LQ9NQ29 371 aaKnown RBP10.77□□□□□ -0.69
HDAC6-226ENST00000483656 TMEM39AQ9NV64 488 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 MYO1AQ9UBC5 1043 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 BARX2Q9UMQ3 279 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-226ENST00000483656 L1RE1Q9UN81 338 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 CAPN6Q9Y6Q1 641 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 NCANO14594 1321 aa10.77□□□□□ -0.69
HDAC6-226ENST00000483656 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
HDAC6-226ENST00000483656 A0A0A6YYK5 440 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-226ENST00000483656 ANKRD62A6NC57 917 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 TRIM43BA6NCK2 446 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 CASTOR2A6NHX0 329 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 HCRTO43612 131 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 BUB1O43683 1085 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 TACC1O75410 805 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 DDHD2O94830 711 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 PARNO95453 639 aaKnown RBP10.76□□□□□ -0.69
HDAC6-226ENST00000483656 CAPN2P17655 700 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 RPL9P32969 192 aaKnown RBP10.76□□□□□ -0.69
HDAC6-226ENST00000483656 NOMO3P69849 1222 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 GRIK3Q13003 919 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 TUSC3Q13454 348 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 TCEAL1Q15170 157 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 UPP1Q16831 310 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 SV2CQ496J9 727 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 DENND1BQ6P3S1 775 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 NECAB2Q7Z6G3 386 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 DEFB128Q7Z7B8 93 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 ZNF280BQ86YH2 543 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 PASD1Q8IV76 773 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 TXLNBQ8N3L3 684 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 WDTC1Q8N5D0 677 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 RNF10Q8N5U6 811 aaKnown RBP10.76□□□□□ -0.69
HDAC6-226ENST00000483656 APBB2Q92870 758 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 SECISBP2LQ93073 1101 aaKnown RBP10.76□□□□□ -0.69
HDAC6-226ENST00000483656 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-226ENST00000483656 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 THAP2Q9H0W7 228 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 TMEM161AQ9NX61 479 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 PUF60Q9UHX1 559 aaKnown RBP10.76□□□□□ -0.69
HDAC6-226ENST00000483656 PCDHGC3Q9UN70 934 aa10.76□□□□□ -0.69
HDAC6-226ENST00000483656 KIAA0355O15063 1070 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 CYP1A2P05177 515 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 FAM163BP0C2L3 166 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 VDRP11473 427 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 CD19P15391 556 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 EN2P19622 333 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-226ENST00000483656 ABCB4P21439 1286 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 WARSP23381 471 aaKnown RBP10.75□□□□□ -0.69
HDAC6-226ENST00000483656 LMO2P25791 158 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 CASQ1P31415 396 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 CDH5P33151 784 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-226ENST00000483656 AARSP49588 968 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC6-226ENST00000483656 GATMP50440 423 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 CENPCQ03188 943 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 DSC1Q08554 894 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 PTP4A2Q12974 167 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 NOMO2Q5JPE7 1267 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 NAA35Q5VZE5 725 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 GLB1LQ6UWU2 654 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-226ENST00000483656 TRIM72Q6ZMU5 477 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 UNC93AQ86WB7 457 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 PDCL2Q8N4E4 241 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 TTC39CQ8N584 583 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 TOP6BLQ8N6T0 577 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 KIF18AQ8NI77 898 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 CPA5Q8WXQ8 436 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 SENP8Q96LD8 212 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 CASD1Q96PB1 797 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 LPIN3Q9BQK8 851 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 COG5Q9UP83 839 aa10.75□□□□□ -0.69
HDAC6-226ENST00000483656 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-226ENST00000483656 TNRC18O15417 2968 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-226ENST00000483656 GRID2IPA4D2P6 1211 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 F8W810 466 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 O00370 1275 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 CYB561D2O14569 222 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 GABRDO14764 452 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 TIMP1P01033 207 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 GNL1P36915 607 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-226ENST00000483656 GPC5P78333 572 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 CNGA2Q16280 664 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 TIGD5Q53EQ6 642 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 WSCD1Q658N2 575 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC6-226ENST00000483656 MON1BQ7L1V2 547 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 DPH6Q7L8W6 267 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 ACOT1Q86TX2 421 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms