RNA–Protein interactions for RNA: ENST00000483519.5

USP40-214, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 1 (best)

Gene USP40, Length 2,722 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-214ENST00000483519 KRT5P13647 590 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 MAPK6Q16659 721 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 PLEKHG4Q58EX7 1191 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 SCYL3Q8IZE3 742 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 ZNF184Q99676 751 aaPredicted RBP14.01□□□□□ -0.17
USP40-214ENST00000483519 GORASP1Q9BQQ3 440 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 ZNF577Q9BSK1 485 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 TEKT3Q9BXF9 490 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 MAK16Q9BXY0 300 aaKnown RBP14.01□□□□□ -0.17
USP40-214ENST00000483519 EHMT1Q9H9B1 1298 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 ARL8BQ9NVJ2 186 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 HEY2Q9UBP5 337 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 A0A0G2JND7 137 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 A0A1W2PPM1 405 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 TBX10O75333 385 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 NSFP46459 744 aaKnown RBP14.01□□□□□ -0.17
USP40-214ENST00000483519 GEMIN4P57678 1058 aaKnown RBP14.01□□□□□ -0.17
USP40-214ENST00000483519 ZBTB16Q05516 673 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 LAMB3Q13751 1172 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 FASTKD3Q14CZ7 662 aaKnown RBP14.01□□□□□ -0.17
USP40-214ENST00000483519 ZC3H12AQ5D1E8 599 aaKnown RBP14.01□□□□□ -0.17
USP40-214ENST00000483519 DAB2IPQ5VWQ8 1189 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 ENOSF1Q7L5Y1 443 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 ZBED8Q8IZ13 594 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 FBXL13Q8NEE6 735 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 RFWD2Q8NHY2 731 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 GATA6Q92908 595 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 FETUBQ9UGM5 382 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 POLLQ9UGP5 575 aa14.01□□□□□ -0.17
USP40-214ENST00000483519 MTO1Q9Y2Z2 717 aaKnown RBP14.01□□□□□ -0.17
USP40-214ENST00000483519 ALOX15BO15296 676 aa14□□□□□ -0.17
USP40-214ENST00000483519 ADRB2P07550 413 aa14□□□□□ -0.17
USP40-214ENST00000483519 TAL1P17542 331 aaPredicted RBP14□□□□□ -0.17
USP40-214ENST00000483519 ADRA1DP25100 572 aa14□□□□□ -0.17
USP40-214ENST00000483519 PHBP35232 272 aa14□□□□□ -0.17
USP40-214ENST00000483519 ARSEP51690 589 aa14□□□□□ -0.17
USP40-214ENST00000483519 ARFIP2P53365 341 aa14□□□□□ -0.17
USP40-214ENST00000483519 KRT72Q14CN4 511 aa14□□□□□ -0.17
USP40-214ENST00000483519 SNRNP35Q16560 246 aaKnown RBP14□□□□□ -0.17
USP40-214ENST00000483519 EAPPQ56P03 285 aaPredicted RBP14□□□□□ -0.17
USP40-214ENST00000483519 EFHC2Q5JST6 749 aa14□□□□□ -0.17
USP40-214ENST00000483519 CDC42EP5Q6NZY7 148 aa14□□□□□ -0.17
USP40-214ENST00000483519 CAPN12Q6ZSI9 719 aa14□□□□□ -0.17
USP40-214ENST00000483519 ZNF677Q86XU0 584 aa14□□□□□ -0.17
USP40-214ENST00000483519 ARHGAP18Q8N392 663 aa14□□□□□ -0.17
USP40-214ENST00000483519 ALKBH8Q96BT7 664 aaKnown RBP14□□□□□ -0.17
USP40-214ENST00000483519 NR1H4Q96RI1 486 aaPredicted RBP14□□□□□ -0.17
USP40-214ENST00000483519 COA1Q9GZY4 146 aa14□□□□□ -0.17
USP40-214ENST00000483519 VPS11Q9H270 941 aa14□□□□□ -0.17
USP40-214ENST00000483519 ANGPTL2Q9UKU9 493 aa14□□□□□ -0.17
USP40-214ENST00000483519 ZNF148Q9UQR1 794 aa14□□□□□ -0.17
USP40-214ENST00000483519 SH3BP1Q9Y3L3 701 aa14□□□□□ -0.17
USP40-214ENST00000483519 ZNF646O15015 1829 aaPredicted RBP14□□□□□ -0.17
USP40-214ENST00000483519 LIASO43766 372 aa14□□□□□ -0.17
USP40-214ENST00000483519 RNF8O76064 485 aa14□□□□□ -0.17
USP40-214ENST00000483519 NDUFB10O96000 172 aa14□□□□□ -0.17
USP40-214ENST00000483519 ESRRAP11474 423 aaPredicted RBP14□□□□□ -0.17
USP40-214ENST00000483519 GPS1Q13098 491 aa14□□□□□ -0.17
USP40-214ENST00000483519 CEP55Q53EZ4 464 aa14□□□□□ -0.17
USP40-214ENST00000483519 LIN9Q5TKA1 542 aa14□□□□□ -0.17
USP40-214ENST00000483519 PDCD7Q8N8D1 485 aaKnown RBP14□□□□□ -0.17
USP40-214ENST00000483519 ZSWIM2Q8NEG5 633 aa14□□□□□ -0.17
USP40-214ENST00000483519 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
USP40-214ENST00000483519 CCDC127Q96BQ5 260 aa14□□□□□ -0.17
USP40-214ENST00000483519 MRRFQ96E11 262 aaKnown RBP14□□□□□ -0.17
USP40-214ENST00000483519 DTNBP1Q96EV8 351 aa14□□□□□ -0.17
USP40-214ENST00000483519 MANSC1Q9H8J5 431 aa14□□□□□ -0.17
USP40-214ENST00000483519 METTL5Q9NRN9 209 aaKnown RBP14□□□□□ -0.17
USP40-214ENST00000483519 RAB20Q9NX57 234 aa14□□□□□ -0.17
USP40-214ENST00000483519 KANSL3Q9P2N6 904 aa14□□□□□ -0.17
USP40-214ENST00000483519 SHOC2Q9UQ13 582 aa14□□□□□ -0.17
USP40-214ENST00000483519 NUMBLQ9Y6R0 609 aa14□□□□□ -0.17
USP40-214ENST00000483519 UMODL1Q5DID0 1318 aa14□□□□□ -0.17
USP40-214ENST00000483519 GOLGA8IPA6NC78 632 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 GOLGA8JA6NMD2 632 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 CFBP00751 764 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 YBX3P16989 372 aaKnown RBP eCLIP13.99□□□□□ -0.17
USP40-214ENST00000483519 MCCD1P59942 119 aaPredicted RBP13.99□□□□□ -0.17
USP40-214ENST00000483519 GTF2BQ00403 316 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 CDK16Q00536 496 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 OVGP1Q12889 678 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 CCDC142Q17RM4 750 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 HP1BP3Q5SSJ5 553 aaPredicted RBP13.99□□□□□ -0.17
USP40-214ENST00000483519 FOXB2Q5VYV0 432 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 DRICH1Q6PGQ1 229 aaPredicted RBP13.99□□□□□ -0.17
USP40-214ENST00000483519 TMEM179Q6ZVK1 233 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 HAUS6Q7Z4H7 955 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 USP37Q86T82 979 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 OGFOD1Q8N543 542 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 DRAXINQ8NBI3 349 aaPredicted RBP13.99□□□□□ -0.17
USP40-214ENST00000483519 PHC3Q8NDX5 983 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 DTX3LQ8TDB6 740 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 SKA1Q96BD8 255 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 CCDC28BQ9BUN5 200 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 VPS33BQ9H267 617 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 LTBP3Q9NS15 1303 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 WDR91A4D1P6 747 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 CD58P19256 250 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 GJC1P36383 396 aa13.99□□□□□ -0.17
USP40-214ENST00000483519 SSR1P43307 286 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms