RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, human

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPGR-208	ENST00000482855	ZNF720	Q7Z2F6	126 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	LRRC6	Q86X45	466 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	TMPRSS6	Q8IU80	811 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	SCUBE1	Q8IWY4	988 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	TCP10L	Q8TDR4	215 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	VPS11	Q9H270	941 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	DNALI1	O14645	258 aa	Predicted RBP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	TM9SF1	O15321	606 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	P4HA2	O15460	535 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	TMCC1	O94876	653 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	ERF	P50548	548 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	INHBC	P55103	352 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	DEUP1	Q05D60	604 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	KLF1	Q13351	362 aa	Predicted RBP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	RASA2	Q15283	850 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	EPC2	Q52LR7	807 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	TTC7B	Q86TV6	843 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	MYLK4	Q86YV6	388 aa	Predicted RBP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	ZBED8	Q8IZ13	594 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	ZNF526	Q8TF50	670 aa	Predicted RBP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	LZIC	Q8WZA0	190 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	FAM20A	Q96MK3	541 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	EBF3	Q9H4W6	596 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	SEL1L	Q9UBV2	794 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	PLIN4	Q96Q06	1357 aa		11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	COL11A2	P13942	1736 aa	Predicted RBP	11.63	□□□□□ -0.55
RPGR-208	ENST00000482855	SMIM31	A0A1B0GVY4	71 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ATP2A1	O14983	1001 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	TGDS	O95455	350 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ITGA2B	P08514	1039 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ADSS	P30520	456 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	VAMP7	P51809	220 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	PPP3CA	Q08209	521 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	MED21	Q13503	144 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	DBN1	Q16643	649 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855		Q4G0T1	1027 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	GPATCH4	Q5T3I0	446 aa	Known RBP	11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	KCTD1	Q719H9	257 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	PPM1K	Q8N3J5	372 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ZNF276	Q8N554	614 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ARHGEF1	Q92888	912 aa	Known RBP	11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	DDX27	Q96GQ7	796 aa	Known RBP	11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	MPP4	Q96JB8	637 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	PANX3	Q96QZ0	392 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	KCNK13	Q9HB14	408 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ALG13	Q9NP73	1137 aa	Known RBP	11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	RHBDL2	Q9NX52	303 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ARMCX1	Q9P291	453 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	CIDEB	Q9UHD4	219 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	PCDHA1	Q9Y5I3	950 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	LRRC37A	A6NMS7	1700 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	USP1	O94782	785 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	CYP11B1	P15538	503 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	GEMIN4	P57678	1058 aa	Known RBP	11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ACTR3	P61158	418 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	MAP3K10	Q02779	954 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	AP3B2	Q13367	1082 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	C1orf146	Q5VVC0	180 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	ACAD10	Q6JQN1	1059 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	C1orf186	Q6ZWK4	172 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	RASSF3	Q86WH2	238 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	SLC9A9	Q8IVB4	645 aa		11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	NMD3	Q96D46	503 aa	Known RBP	11.62	□□□□□ -0.55
RPGR-208	ENST00000482855	DLD	P09622	509 aa	Known RBP	11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	CCDC166	P0CW27	439 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	MYL2	P10916	166 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	HARS	P12081	509 aa	Known RBP	11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	BMP3	P12645	472 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	AKR1B1	P15121	316 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	ARL4C	P56559	192 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	PDIA2	Q13087	525 aa	Known RBP	11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	HNRNPD	Q14103	355 aa	Known RBP	11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	ODR4	Q5SWX8	454 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	DPP8	Q6V1X1	898 aa	Predicted RBP	11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	CENPU	Q71F23	418 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	OR6Y1	Q8NGX8	325 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	LENG9	Q96B70	501 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	FIZ1	Q96SL8	496 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	ARHGEF4	Q9NR80	690 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	NDUFA13	Q9P0J0	144 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	SLC17A7	Q9P2U7	560 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	FER1L6	Q2WGJ9	1857 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	C2orf71	A6NGG8	1288 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	GOLGA8R	I6L899	631 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	ATP9B	O43861	1147 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	TM7SF2	O76062	418 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	ENO1	P06733	434 aa	Known RBP	11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	QRICH1	Q2TAL8	776 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	EFHC2	Q5JST6	749 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	FAM91A1	Q658Y4	838 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	ULK2	Q8IYT8	1036 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	KCTD17	Q8N5Z5	321 aa		11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	ALKBH8	Q96BT7	664 aa	Known RBP	11.61	□□□□□ -0.55
RPGR-208	ENST00000482855	RBM17	Q96I25	401 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms